| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1080 |
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| Symbol | nqrA |
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| ID | 3519825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1099928 |
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| End bp | 1101265 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637283544 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit A |
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| Protein accession | YP_267824 |
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| Protein GI | 71279370 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1726] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA |
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| TIGRFAM ID | [TIGR01936] NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTACAA TAAAAAAAGG CTTGGATGTT CCTGTAAAAG GCGCTCCGCA GCAGGTAATC
CATGATGGTC CGTCCATCAA AACCGTTGCA ACACTCGGTG AAGAGTTTGT GGGTATGCGT
CCAACCATGT TTGTTAAAGT GGGTGACCGC GTAAAAAAAG GTCAGGTGAT TTTTGAAGAT
AAAAAAAATC CTGGCGTTAT ATTCACAGCT CAAGCTGCCG GTGTTGTAAA AGAAATTAAC
CGCGGTGAAA AACGTGTTTT ACAATCAGTT GTTATCGATG TCGATGGCTA CGATCAAGAA
ACGTTTACCG TTTATCCAGC AACTGAATTC GCTTCTCTAG CACGTGAAAA CGTTGTTAAG
AACTTAGTCG ATTCAGGTTT ATGGACAGCA TTAAGAACGC GTCCATTTAG CAAAGTACCT
GCTATTGATA GTGAACCTTC TGCGATTTTT GTTAGTGCGA TGGATACCAA TCCATTGGCG
GCGAATCCAG AAATCGTTAT CGGTGAGCAA AGTGAAGCGT TTAAAAATGG TTTAACCATT
TTATCTCGTT TAACAAGTGG TGAAGTATTT GTTAGCAAAG CGCCAGGGGC AAATATCCCT
GTAGATAGCA ATGCAACAGT AACTGAATTT GCTGGTAAGC ATCCTGCAGG CCTTGTAGGT
ACGCATATTC ACTTCTTAAA ATCTGCAAGT GCGGAAAGAT TTGTTTGGCA TGTTGGTTAT
CAAGATGTTA TCGCGATTGC TAAATTGTTC ACTACAGGTG AAATCGATAA TACTCGTGTT
ATTTCACTTG CCGGTCCTGC CGCCACAAAC CCACGTTTAG TACGTACGGT TTTAGGTGCT
AGCACTGCTG AATTATCAGC AGGCGAAACC GCTGAAGGTG AATTACGTGT TGTTTCTGGT
TCACTATTAA TGGGTGCAAC AGCCAGCGCT GTTCACGGTT ATTTAGGTCG TTATAACGTA
CAAGTATCAT TAATTCTTGA AGGTCGTGAA AAAGAATTTA TCGGTTACAT GTACCCAGGT
CCTAATAAGT TCTCAGTAAC TCGTGCTTAT ATGTCGCACT TTTTCTCGAG TAAGTTATTT
AGTATGACTA CTACGACTAA CGGTAGCTCA CGTGCCATGG TGCCAATTGG TAACTTTGAA
CGTGTTATGC CATTAGATAT TTTACCTACC TTGTTTTTAC GCGATATTTG TTCTGGTGAT
ACCGACGGCG CGCAACAACT AGGTGCCTTA GAGCTAGACG AAGAAGATTT AGCACTGTGT
ACATTTGTTT GTCCCGGCAA AACAGATTAC GGTGTAATTC TTCGTGATTG CCTAACCACA
ATCGAAAAGG AAGGTTAG
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| Protein sequence | MITIKKGLDV PVKGAPQQVI HDGPSIKTVA TLGEEFVGMR PTMFVKVGDR VKKGQVIFED
KKNPGVIFTA QAAGVVKEIN RGEKRVLQSV VIDVDGYDQE TFTVYPATEF ASLARENVVK
NLVDSGLWTA LRTRPFSKVP AIDSEPSAIF VSAMDTNPLA ANPEIVIGEQ SEAFKNGLTI
LSRLTSGEVF VSKAPGANIP VDSNATVTEF AGKHPAGLVG THIHFLKSAS AERFVWHVGY
QDVIAIAKLF TTGEIDNTRV ISLAGPAATN PRLVRTVLGA STAELSAGET AEGELRVVSG
SLLMGATASA VHGYLGRYNV QVSLILEGRE KEFIGYMYPG PNKFSVTRAY MSHFFSSKLF
SMTTTTNGSS RAMVPIGNFE RVMPLDILPT LFLRDICSGD TDGAQQLGAL ELDEEDLALC
TFVCPGKTDY GVILRDCLTT IEKEG
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