Gene CPS_1077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1077 
Symbol 
ID3520032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand+ 
Start bp1096898 
End bp1097476 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content42% 
IMG OID637283541 
ProductDedA family membrane protein 
Protein accessionYP_267821 
Protein GI71279573 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGTTT TTTCAAGTCT TTACCAGTGG ACTTTACGCT GGGCAGAACA TCAGTTTGCC 
CCGCGTTTCT TAGTAGCACT TACCTTTGCT GAGTCCATAT TTTTCCCTAT CCCACCTGAT 
GTATTACTTG CGCCTATGGT GTTAGCAAAA CCACAAAAGG CATGGTATTT TGCGGGAATA 
ACCACCATTG CTTCAATTCT AGGAGGCTCA GTTGGTTATT GGCTTGGTTA CTTAATGTTT 
GAACCGTGGA TCCAGCCACT TATTTCTAAC TTTGGTTATC AAGCGCGATT TGATATCGCT 
ATTGGTTGGT TTAATGAGTG GGGTGTATGG GTAGTATTTA TTGCTGGATT TTCACCAATA 
CCTTACAAAT TGTTTACTGT CAGTGCGGGA TTTTTGCATA TGGCTTTCTT ACCATTTTTT 
ATTGCTTCTG CTATAGGTCG AGGTTTACGT TTTTTCCTAG TGGCGGGCCT AATTAAGTGG 
GGCGGTAGTG CCATGGAACA AAAGATAAAG CAGTGGGTTG ATGTTTTAGG CTGGGGAATT 
GTTGGCGCCA TCGTTGTTGG TTATTTTGTT TTACGCTAA
 
Protein sequence
MKVFSSLYQW TLRWAEHQFA PRFLVALTFA ESIFFPIPPD VLLAPMVLAK PQKAWYFAGI 
TTIASILGGS VGYWLGYLMF EPWIQPLISN FGYQARFDIA IGWFNEWGVW VVFIAGFSPI 
PYKLFTVSAG FLHMAFLPFF IASAIGRGLR FFLVAGLIKW GGSAMEQKIK QWVDVLGWGI 
VGAIVVGYFV LR