| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1056 |
|---|
| Symbol | napB |
|---|
| ID | 3518654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 1081081 |
|---|
| End bp | 1081584 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637283520 |
|---|
| Product | periplasmic nitrate reductase, cytochrome c-type subunit |
|---|
| Protein accession | YP_267800 |
|---|
| Protein GI | 71277776 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3043] Nitrate reductase cytochrome c-type subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATT TAAACCTAGC AGCAATTGCC AGTTTATTGG TACTAGCAGT ATCGCCAATT
ATGTACTCTC TAAACGCTAA TGCAGCAGAT AAAGAAACAG TTAACTCTGT TGCAACACTA
AGGGATGCAA CTCCTATTGA TGTGCAAAAA GAGCCTAACA TCATTCCTAA AGTGATAAAC
AAGGATATCA AACAGGGTCG TAACTACCCT ATGCAGCCAC CTGTTATTCC ACATACTACG
CGTAGTTATG AGGTGAATAA AAACAATAAC AAGTGTATGT CTTGTCATTC TCGTCATCGT
ACGGAAAAAT CACAGGCACC TATGGTGAGT GTTACACATT ACATGGACAG AGATGGTAAC
TTCTTAGCAG AAGTATCCCC TCGTCGTTAT TTTTGTAATC AGTGTCATGT CACTCAACTT
GATGCTGAAC CACTAGTGGA AAATACTTTT GTTGATATGC ATACTTTGAT GAAACAAAAA
ACCACTAGCG CTAAAGAGCA TTAG
|
|---|
| Protein sequence | MKNLNLAAIA SLLVLAVSPI MYSLNANAAD KETVNSVATL RDATPIDVQK EPNIIPKVIN
KDIKQGRNYP MQPPVIPHTT RSYEVNKNNN KCMSCHSRHR TEKSQAPMVS VTHYMDRDGN
FLAEVSPRRY FCNQCHVTQL DAEPLVENTF VDMHTLMKQK TTSAKEH
|
|---|
| |