| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1033 |
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| Symbol | ccmB |
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| ID | 3520271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1059078 |
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| End bp | 1059893 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637283498 |
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| Product | heme exporter protein CcmB |
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| Protein accession | YP_267782 |
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| Protein GI | 71279810 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCTTAA AAGCCCAGTC TAGTCAAATG ACTGAAAACT TAGTAGGCAT TATCGATGAG
ACTCTCATAG ATAATGCTTT GATAGAGAAT ACTGTGATAG TGAATACCGC TTTAGAAAGT
ACTGCACAGT CATCACAACC GCTCTCTTAT CGCCATGCCT TTATGTTGGT ATTAAAACGT
GATCTTACCA TTGCGATGCG CCATAAAGAT GACATCATTA ATCCCTTACT ATTTTTTGTT
ATTGTAGTCA CACTTTTCCC TTTAGGTATT GGTCCTGAAG CACAAACGTT AAGCCGTATT
GCCCCAGGTA TTATTTGGGT AGCAGCATTA TTAGCGACCC TTTTATCATT AGACCGATTA
TTTAAATCAG ATCACCTTGA TGGTTCACTT GAACAAATGT TACTTAGCCC TCACCCGATA
TTTGTATTAG TGCTGGCTAA AATATTCGCT CATTGGCTTA TTACTGGCTT ACCACTTCTT
TTAATAGCGC CGCTGTTAGC TGTGCTCCTG CATTTAGATG AACACAGTTA CACCGCATTA
TTACTTACCT TATTGCTAGG TACGCCTGTA CTTAGTCTAC TTGGTGCAGT GGGTGTTGCA
CTTACCGTAG GGATTAAAAA AGGGGGGGTA TTACTCAGCT TACTTGTTTT ACCCCTTTAT
ATTCCGGTAT TAATTTTTGC TACCAGCGCG ATAGATACTG CCGCGCTTGG CTTACCTTAC
AGCGGTCAAC TTGCTATAAT CGCCGCATTA TTCTTTGGAT CTTTAACGCT CGCCCCCTTT
GCTGTTGGGG CCGCCCTAAA AGTGAGTACC AACTGA
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| Protein sequence | MTLKAQSSQM TENLVGIIDE TLIDNALIEN TVIVNTALES TAQSSQPLSY RHAFMLVLKR
DLTIAMRHKD DIINPLLFFV IVVTLFPLGI GPEAQTLSRI APGIIWVAAL LATLLSLDRL
FKSDHLDGSL EQMLLSPHPI FVLVLAKIFA HWLITGLPLL LIAPLLAVLL HLDEHSYTAL
LLTLLLGTPV LSLLGAVGVA LTVGIKKGGV LLSLLVLPLY IPVLIFATSA IDTAALGLPY
SGQLAIIAAL FFGSLTLAPF AVGAALKVST N
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