| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1007 |
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| Symbol | |
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| ID | 3523295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1027156 |
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| End bp | 1028787 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637283472 |
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| Product | putative decarboxylase |
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| Protein accession | YP_267756 |
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| Protein GI | 71278937 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAA CTAAGCGCAT TGCAGAAGCA ACGCAAGAGT CTTTACATCG AATTTTTACC
ATTGCTGAAG CTCCTGATTC TACCTTAGGA CGTCTTGAGC AAGAGATGTC GCAAAATTTA
GTGGGTTTTT TAAATAATCA CATTGTTGCT AGCAAAAATG CCCTAACTGA TATTGAGCAA
GATTTCATTA ATGCTCGTAT TCCCGAGCAG CCTGAATTTG TTTCTGATCA CATGCACCAT
TTGCTCGATA AATTAGTCGC GCAGTCAGTA CATACTTCAA GTCCTAGTTT TATCGGTCAT
ATGACCTCAG CATTGCCTTC TTTTATTTTA CCTCTGTCTA AGTTGATGGT GGGTTTAAAT
CAAAACTTAG TTAAAGTTGA AACATCAAAA GCTTTTACGC CATTAGAGCG CCAAGTTTTA
GGCATGATGC ACAACTTGGT TTATCAACAC GATGATGTCT TTTACAAAAA CTGGATGCAC
AGTGCTGAAC ATTCCCTTGG CGCCTTTTGT TCAGGTGGTA CTGTCGCTAA TATTACCGCC
TTGTGGGTAG CACGTAATAA GCTGTTAAAG GCTGATGGTG ATTTTAGGGG CGTGGCTCGC
GAGGGCTTAC ATCGTGCTAT GAGGCATTAT GGCTATCAAG ACTTAGCTAT TTTAGTGTCC
GATCGTGGTC ATTACTCATT GAAAAAATCG GCTGATATTT TAGGTATCGG CCAAGAAAAT
GTTATTGCGA TACCTACCGA TGAACATAAT AAAATAGATT GCCAGAAGCT GGCGGATAAA
TGTCAGCAAC TGGCAGCACA AAATATCAAA GTACTGGCAA TTGTTGGCGT GGCCGGTACA
ACTGAAACCG GTAATATTGA TCCACTTGAT AAAATTGCTG AGATAGCCCA GCAAAATCAA
TGTCATTTTC ATGTTGATGC TGCTTGGGGC GGAGCAACAT TATTGTCGAA CAAATATCGT
CCTTTGCTTA AAGGCATCGA ACAAGCTGAC TCAGTGACCA TTGACGCACA CAAACAGATG
TATGTGCCTA TGGGGGCAGG TTTGGTTATT TTTAAAGATC CTGCCTCGGT AAGTGCGATT
GAGCATCATG CGGAATATAT ATTACGTAAA GGCTCAAAAG ATTTAGGTAG TCATACTTTA
GAAGGCTCTC GCCCGGGAAT GGCGATGTTA GTGTATTCGA GCTTGCATAT TATTAGCCGA
CCAGGTTATG AAATGCTTAT TAATCAGGCC ATTGAAAAAG CAGAGTATTT TGCAGATATT
ATTCACCAGC ATGATGATTT TGAACTAATT ACTCGCCCTG AATTGTGTCT ATTAACGTAT
CGCTATGCAC CTAAGTCAGT TCAGGCTCTA TTAGCTCGAA ATGATGATGA AGCTAATAAG
TCGGTGAACA TGTTGCTCGG TAAATTGACC AAGTTTATTC AAAAGCGTCA ACGTGAAGAT
GGGCGCTCTT TTGTCTCACG AACTCGCATT GAAGTAAGTC GATATGGTGG TGAAAAAGTT
ATCGTTTTTA GAGTTGTGTT AGCAAACCCA CTAACTACTA AAGAAATTTT GCAAGGTATA
TTGCAGGAGC AATGTCAGCT TGCACAGGAA AGTGAGCAAT TTTTACCTGA GTTGTTACAA
GCAGCAAAAT AA
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| Protein sequence | MKATKRIAEA TQESLHRIFT IAEAPDSTLG RLEQEMSQNL VGFLNNHIVA SKNALTDIEQ
DFINARIPEQ PEFVSDHMHH LLDKLVAQSV HTSSPSFIGH MTSALPSFIL PLSKLMVGLN
QNLVKVETSK AFTPLERQVL GMMHNLVYQH DDVFYKNWMH SAEHSLGAFC SGGTVANITA
LWVARNKLLK ADGDFRGVAR EGLHRAMRHY GYQDLAILVS DRGHYSLKKS ADILGIGQEN
VIAIPTDEHN KIDCQKLADK CQQLAAQNIK VLAIVGVAGT TETGNIDPLD KIAEIAQQNQ
CHFHVDAAWG GATLLSNKYR PLLKGIEQAD SVTIDAHKQM YVPMGAGLVI FKDPASVSAI
EHHAEYILRK GSKDLGSHTL EGSRPGMAML VYSSLHIISR PGYEMLINQA IEKAEYFADI
IHQHDDFELI TRPELCLLTY RYAPKSVQAL LARNDDEANK SVNMLLGKLT KFIQKRQRED
GRSFVSRTRI EVSRYGGEKV IVFRVVLANP LTTKEILQGI LQEQCQLAQE SEQFLPELLQ
AAK
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