Gene CPS_0972 details

Gene Information

• Locus tag: CPS_0972
• Symbol: efp
• ID: 3520133
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 977194
• End bp: 977769
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637283437
• Product: translation elongation factor P
• Protein accession: YP_267721
• Protein GI: 71279673
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
• TIGRFAM ID: [TIGR00038] translation elongation factor P

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAATT TCAGTACCAA CCAGTTCAAA GCTGGACTTA AAATCATGCT TGATGGCGAA 
CCTTGTAATA TTCTTGAAAA TGAATTGGTA AAACCAGGTA AAGGCCAAGC CTTTAGCCGT 
GTTAAAATTC GTAAACTCGT TTCAGGTAAA GTCTTAGAAA AAACCTTCAA ATCAGGTGAA 
ACTGTTGAAG GTGCTGACGT AATGGAAGTT GAACTTGCCT ATTTATACGC TGATGGTGAA 
TTTTGGCACT TTATGAACAA CGAAACATTC GAGCAAATTG GCGCAGAAGA AAAAGCCCTA 
GGCGAGACTG TAAAGTGGTT AGTTGAAGGT GATATTTGTA CTATTACCTT ATGGAATGGT 
ACGCCAATTA CAGTTACGGC AGCAAACTTT GTTGAAATCG ATATTACCGA AACAGATCCT 
GGTTTAAAAG GGGATACTGC GGGTACTGGT GGTAAGCCAG CAACATTAGC AACTGGCGCA 
GTTGTTCGTG TACCTTTATT TGTTCAAATC GGCGAGAAAG TTCGTATTGA TACACGTTCA 
GGTGAATATG TTTCGCGAGC AACAAAAGCA CAATAA 

 

Protein sequence

MANFSTNQFK AGLKIMLDGE PCNILENELV KPGKGQAFSR VKIRKLVSGK VLEKTFKSGE 
TVEGADVMEV ELAYLYADGE FWHFMNNETF EQIGAEEKAL GETVKWLVEG DICTITLWNG 
TPITVTAANF VEIDITETDP GLKGDTAGTG GKPATLATGA VVRVPLFVQI GEKVRIDTRS 
GEYVSRATKA Q