Gene CPS_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0942 
Symbol 
ID3518585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp951183 
End bp951665 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content42% 
IMG OID637283407 
Productputative lipoprotein 
Protein accessionYP_267691 
Protein GI71278815 
COG category[S] Function unknown 
COG ID[COG5608] Conserved secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.236049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTAG CTAGAACACT GCCCATACGT ATATTTTTCG TGGCTGCACT ACTTTTTCTG 
TCTGGCTGCG CCACCATGAA TCTAGACTAC GAAGAGCCCA CTATCGAGTT AGTTTCTTTT
AAGGCTTTGC CAGCTAATGG CTTCGAACAA AATTTTGAAA TAGGTTTGAA ATTAACCAAT
CCTAATGATT TTGAATTGCC GTTCAATGGT ATTAGCTATC AACTAAGCGT GGCAGGAGAG
GCATTAGCAC ATGGTGTTGC CGCGAATATC CCCACTGCAA CAGCATACGG AGAGTCACGC
TTTGTAGTTC CTGTTTCAAC CAGCTTAATG GGAGGCTTCA AGGTGATTAG AGCGCTTATG
AATAGTAAAG GACAAGATAT CAGTTACCAA TTGAAGGCCA AATTAGATAT CGACATTCCC
TTTATGCCCA AGTTAACTGT TATTCAAGAC GGTATTATTC CCCTCGGTCA AAAGCCTCAA
TAA
 
Protein sequence
MTLARTLPIR IFFVAALLFL SGCATMNLDY EEPTIELVSF KALPANGFEQ NFEIGLKLTN 
PNDFELPFNG ISYQLSVAGE ALAHGVAANI PTATAYGESR FVVPVSTSLM GGFKVIRALM
NSKGQDISYQ LKAKLDIDIP FMPKLTVIQD GIIPLGQKPQ