Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0942 |
Symbol | |
ID | 3518585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 951183 |
End bp | 951665 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637283407 |
Product | putative lipoprotein |
Protein accession | YP_267691 |
Protein GI | 71278815 |
COG category | [S] Function unknown |
COG ID | [COG5608] Conserved secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.236049 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTTAG CTAGAACACT GCCCATACGT ATATTTTTCG TGGCTGCACT ACTTTTTCTG TCTGGCTGCG CCACCATGAA TCTAGACTAC GAAGAGCCCA CTATCGAGTT AGTTTCTTTT AAGGCTTTGC CAGCTAATGG CTTCGAACAA AATTTTGAAA TAGGTTTGAA ATTAACCAAT CCTAATGATT TTGAATTGCC GTTCAATGGT ATTAGCTATC AACTAAGCGT GGCAGGAGAG GCATTAGCAC ATGGTGTTGC CGCGAATATC CCCACTGCAA CAGCATACGG AGAGTCACGC TTTGTAGTTC CTGTTTCAAC CAGCTTAATG GGAGGCTTCA AGGTGATTAG AGCGCTTATG AATAGTAAAG GACAAGATAT CAGTTACCAA TTGAAGGCCA AATTAGATAT CGACATTCCC TTTATGCCCA AGTTAACTGT TATTCAAGAC GGTATTATTC CCCTCGGTCA AAAGCCTCAA TAA
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Protein sequence | MTLARTLPIR IFFVAALLFL SGCATMNLDY EEPTIELVSF KALPANGFEQ NFEIGLKLTN PNDFELPFNG ISYQLSVAGE ALAHGVAANI PTATAYGESR FVVPVSTSLM GGFKVIRALM NSKGQDISYQ LKAKLDIDIP FMPKLTVIQD GIIPLGQKPQ
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