Gene CPS_0940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0940 
Symbol 
ID3519121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp948888 
End bp950084 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content37% 
IMG OID637283405 
Productmajor facilitator family transporter 
Protein accessionYP_267689 
Protein GI71278280 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCA GTAACAAATA CTTGGTTGAA GCCATTGTTT TTATTAGTTA TGTACTATTT 
GCTATGGCTT GGGTAGGCGG CACAGCAAGT ATGGGGCAAA TAATGTCGGC TATGCACATA
GATAGTTTAG CTTCTGCAAG CTTTATCAGT GGCGCGGTAA CCTTGGCAAA AATTGTTGGT
ACGTTCGCTG CTGCTTGGGT TGCGTTAAAG TTTGGCCTTA AGTATGCTTT TTTTATTGCT
AGCTTGTTTA TAGCCATTGG TTTATTAACG CCCTTTGCTC CTAACTATGA ATTGTTATTG
CTAAGTCGAT TCCTGATGGG ATTAGGTGGA GCGTTCATGA TCGTCTACTT CAACCCTATT
GTTATGCAAT GGTTTCCAGT TAATGAACGC CCTGTTATTA ACGGTCTTAA CGCGGTTGCT
TTTAATATTG GTACGGGTGT CGTGTTATGG AAAATGACCG CAATCAACCA ATTCACTGGG
GATTGGAAAA TTAGTTTGAT TAGCTTTTCA ATTGCTAGTT TATTGCTAAG TTTTGTTTGG
CTATTGGTAA ATTTTGAACC TGAGACTCAG GGACACGACC AAGAGAGTCA AACCGTCGAA
AATTACAGTT ATATTGATGG TCTAAAGGAT AAATTTATTT GGGCTTACGG CTTAACTTAT
TCGGGTTTAT TGGCATTTTA TATCTGTCTA TTTACTTTTT ACCCTAAAGC CGGCATTAGC
CAGAGTAAGT GGGTGATAGG TTTTGGTATT GTTGGTACAT TAGCGGGCAT TATTTACAGT
AAAAAAATGC CACTTCGTTT ACCTGTTATT CGATGGTCTG GTGCTATGAT GGTGCTGACT
ATTATTGGGG TATCTTTTAG TAGCAGTGTT TGGTTACAAA CTCTATCTGC CATTGTATTA
GGATTTTTTA TTTTCTTCCC TATCACTGCG CTGGTTTCTA TTCCACATGA GTTACCTAAA
ATGACAGGGC AACGTATTAC CGTAGTATTT AGTTTTTTCT ATTCAATCAG CTACTTACTT
TCTACTGTTA TCTTATGGCT ATTTGGTAAA TTAGTGGATA TGAATCAAGG TGATTATACC
GCTTCATTTA TTCTCATTTC ATTAATAAGT AGTACCTTTT TTATTGGCAG TTTTTTCTTG
CCTGAAACGG GTAAGGTTAA AGAATTAACA ATTAAGGATA AATTATGCGC GGAATAA
 
Protein sequence
MKISNKYLVE AIVFISYVLF AMAWVGGTAS MGQIMSAMHI DSLASASFIS GAVTLAKIVG 
TFAAAWVALK FGLKYAFFIA SLFIAIGLLT PFAPNYELLL LSRFLMGLGG AFMIVYFNPI
VMQWFPVNER PVINGLNAVA FNIGTGVVLW KMTAINQFTG DWKISLISFS IASLLLSFVW
LLVNFEPETQ GHDQESQTVE NYSYIDGLKD KFIWAYGLTY SGLLAFYICL FTFYPKAGIS
QSKWVIGFGI VGTLAGIIYS KKMPLRLPVI RWSGAMMVLT IIGVSFSSSV WLQTLSAIVL
GFFIFFPITA LVSIPHELPK MTGQRITVVF SFFYSISYLL STVILWLFGK LVDMNQGDYT
ASFILISLIS STFFIGSFFL PETGKVKELT IKDKLCAE