Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0809 |
Symbol | |
ID | 3520963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 827693 |
End bp | 828157 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637283274 |
Product | DoxD family protein |
Protein accession | YP_267558 |
Protein GI | 71280497 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.570745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAACAA TTACCCAACG ATTAATTCAA CCTTACACCC AAGTGAGTCA ACTGCTAAAT TATTTACAGC CCCTGGCACT GCTCGGTGCA AGATTTTACG TAGCTTGGGT ATTTTTTGCT TCTGGCCTAA CAAAGCTAAG AGATTGGGAT TCCACTTTAT TTTTGTTTGA AGAAGAATAC AGCGTGCCGT TTATTCCTTT TGAACTAGCT GCGTATTTGG GCACAGCAGG TGAACTCATT CTGCCAGTTT TATTGATACT AGGTTTAGCC AGTCGATTTG GTGCTTTAGG TTTAACTGTT GTAAATATCG TTGCCGTTGT CAGCTTAACT GAGATTGCTC CCGCAGCACT TTATTCACAC GTTATATGGG GCTTACTGCT ATTGCAAGTT GTGTTATTTG GTGCAGGGAA ATTATCATTA GATAACTTAT TGAAAATAAA GCTAAGCAAG GTTACTGACA ACTAA
|
Protein sequence | MTTITQRLIQ PYTQVSQLLN YLQPLALLGA RFYVAWVFFA SGLTKLRDWD STLFLFEEEY SVPFIPFELA AYLGTAGELI LPVLLILGLA SRFGALGLTV VNIVAVVSLT EIAPAALYSH VIWGLLLLQV VLFGAGKLSL DNLLKIKLSK VTDN
|
| |