| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0688 |
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| Symbol | |
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| ID | 3518497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 692301 |
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| End bp | 694061 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637283153 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_267438 |
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| Protein GI | 71278747 |
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| COG category | [G] Carbohydrate transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATG TTATTCGCTT TTTTGGTGGC CAGTATATTT ATGGTGTTGG TGGCGATTTT
GCGGCTAACT TAATAGCAGC TCTTAGTGTT AATGAGCATG GCGAAGGCAT TCAAATTAAT
CCCTCAAGTA ATGAAATGCA TGCAGGATTT TCAGCGTGTG CTCAGGCTGA AGTCGACGGT
ATGGGGTTTT GTTTAACGAC TTATATGGTT GGTAGTTTAC CTTGTACCAG TGCTGCCGCA
TTAGCGGTCA CTGAGGGATT ACCTGTTGTC TTTATTTCAG GTGCTCCTGC AGAAAGTGAG
GTGAATCAAG TAGCTATTCA TCACACTATT CATCCCAATG CCTCATGGAA AGCTGAATAT
GATAATGCTT TAGAAGCTTT TTCTGCCTTG GGTATGCGTG TAGAGCGTTT ACAAGGACAG
CGCGTAGAAG GACATCCTAA TCTTGCCGGA CAACGTTTTT ATCAAATTGT CAGTGAAGCG
TATAAGAATA AGCAGCCCGT TTTTATTGAA GTACCACGCG ACCAAGTCTT TGCTAAAACC
CAACCCATTA AGCTACCAAG CACATTGGAT GATATTTGCT GTGGAAGTAA TATTTTAGCG
GGGACAGAGT TAATTGTTGA TAATATTTTA GATAAATTGG CCCAAGCCAA AGCACCTATG
CTCTATTTAG GCGATCGCCT AAAGCACAAT GAAAAACTTA AACATTTGAT TATTAGTTTT
GCGGATAAAT TTAATATTCC CTATGCCACT ACTTGGTTTG CTAAAGGGCT TTTTGATGAA
TACGCACCAT TATGTTTAGG TGCTTATAAT GGTATTTTTA CCCAAACAAC TGGCCGTGAG
TACATTGAAC AACAAGTTGA TTATGTTATT GATATTGCTA CCAGTATATT CCCGCAAGAC
AGTAATATTG CCTTTGGCAC TGGTACCCAT AAAATTGAGC GCTTTGATAA TAAAACACTG
TTAAAAGGCG GTTCACTATT AGAGAAAGAC CTTATCGCTA TCTTTGAGCG CTTGATGGAG
CAAAACATTA GCCCCTTCGA GTTTACAGCG CCATCTCAAA GAGGTTTAAC AGCGCTGTCG
CTACAGCTTG AAAGTAATGA ATTAGCTAGA GGTGATGATG ACATTGATTT TAATAACTTG
GCGCAAACAC TTAATGACTT ACAGGCACAA GATGCCAGTA CCTATGTTTA TCTACCTGAA
GTAGGTAATT CATATTTTGC CAGTTACAGT TTGAAAGTTC GTCAATCAAT ACTTGGTCGC
TCTTGGCTTA CTAATCCTTG GTACGGCGCA ATGGGCACAG CATTACCTTA TGCCAGAGTG
GTCGCTCAAC GCATCAAGTC ACAACAAATA GCGGAACGTG CAGTAGTGAT TATTGGTGAT
GGTGGTTTTC ACTTTCAATT AAATGAATTG ATCCACTTTT TAAAGGATAA ATCAGACGTT
ACTATCGTAT ATATGCGTAA TAATGTTTTT CACTTAGGCA AAAGTGGTGA TGGCGCTATT
TATCACTGTA ATGACAGTGA ATTTGATGTG CATAGTTTAG TGAAAGCCTA TCAAGGTGAT
AGCAAAACAT GTACTAGCGT CGGTGAGTTT AAAGCTTACT TTAAAGCATG CAGTCAGCAA
ACAGGCATCT CCTTAATTGA AGTGCCAGCA AAACCGATTG AAGCAAGACA AAGCAACGAA
CTGAAGTTAT TAAATCTGTA TATCAAATCT CAAAATGGTC AAGCTGAAGC AGTGAAAGCA
TGGCAAGCAT TAACTCAGTA A
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| Protein sequence | MSDVIRFFGG QYIYGVGGDF AANLIAALSV NEHGEGIQIN PSSNEMHAGF SACAQAEVDG
MGFCLTTYMV GSLPCTSAAA LAVTEGLPVV FISGAPAESE VNQVAIHHTI HPNASWKAEY
DNALEAFSAL GMRVERLQGQ RVEGHPNLAG QRFYQIVSEA YKNKQPVFIE VPRDQVFAKT
QPIKLPSTLD DICCGSNILA GTELIVDNIL DKLAQAKAPM LYLGDRLKHN EKLKHLIISF
ADKFNIPYAT TWFAKGLFDE YAPLCLGAYN GIFTQTTGRE YIEQQVDYVI DIATSIFPQD
SNIAFGTGTH KIERFDNKTL LKGGSLLEKD LIAIFERLME QNISPFEFTA PSQRGLTALS
LQLESNELAR GDDDIDFNNL AQTLNDLQAQ DASTYVYLPE VGNSYFASYS LKVRQSILGR
SWLTNPWYGA MGTALPYARV VAQRIKSQQI AERAVVIIGD GGFHFQLNEL IHFLKDKSDV
TIVYMRNNVF HLGKSGDGAI YHCNDSEFDV HSLVKAYQGD SKTCTSVGEF KAYFKACSQQ
TGISLIEVPA KPIEARQSNE LKLLNLYIKS QNGQAEAVKA WQALTQ
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