| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0686 |
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| Symbol | |
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| ID | 3519303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 689448 |
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| End bp | 690731 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637283151 |
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| Product | GGDEF/HAMP domain-containing protein |
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| Protein accession | YP_267436 |
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| Protein GI | 71279179 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATCA GTTTGCTGCA ACGTATCTTT TTTTTCACCC TAAGTTGTTG TTTATTATTT
GTCTTGTTAC TTGGTAGTGT CATCTGGTCA TCACAGGCGA TAGAGCTGGC TTTCAGTCGA
AATCATTATG CGAAACAACT CACTAACCAG ACAAATACAT TAAAGCAGTT GGTCGCCAAT
GATAATATTT ATGACAGTAA TTACAGTATT AATGATTGGC AATCGTTAGA GGTAAAACTA
ACAGCACTAC TCAAATCATC ACCCAAATTA ACAGAGCAAC AGCTAACCAT CCAAAACAGT
CTTCAAAGTC AAAATGAAAG TTTGAAAAAC CTTTTTACTC TGATCAATAA AAACAAACTA
AAAAATGCCA GCGAAGTGAT AAAAACGCAT TTGAAAGCAA AGTTGATGAC ACAGCTAGAA
GCTATTCGAT CAGAGGCCTT ACACTTGTCA GAAATTGCAC AAAAAGATAT TTACAACACC
ATCCAAAACC AAGCTGTTTT TATTATTACA ATTTCTGCTG TCAGCATACT CGCTTTGCTA
TTTGGCGCTT TTACCTTGAC CTCTATCGTC AGAAAATCAT TGACTGAAGT GAAATGTGCT
TTTGAAAAAA ACCACAGTGG TGACTATCAA AATATACAGC TTTCTCATCA TTCACAAGAA
TTTGATAGTA TCGCTGATGC GTTTAATACC ATGAATGAAA AATTAAGTGA ATCTACTATT
TCTCTAACAG AAATGAAAAA AATAGTGGAG GAAAGAACAC ATGTCTTAGA GCAGTTATCA
AGGACTGATC CTCTCACTAA AGTGGCCAAT CGTCGCGCCC TTTTTGAGCG TGCAAATATG
GAATTCTCAC GGGCAATGAG AAGTAAAAAT AACTTGACGT TATTACTATT AGATTGTGAC
TTCTTTAAGA ATGTGAATGA CGAATTTGGT CATTTATTTG GTGATGAGTT GTTAATTCAT
ATTTGTAATA TTTGTGGTCA AGAAATACGA GATATTGACT TTCTAGCGCG ATATGGTGGT
GAAGAATTTA TTATTGTATT ACCAAATTGC GATATAGCTG GTGGTATTGA AACAGCTAAC
CGCATACAGA ATTCACTTGC TAGGCATTGC GTGGCGATAG AAGATAAAGA AGTTTGCGTG
ACCTTAAGTA TTGGTATTTC CATGCTCAGT GAACGACATA AAAACTTAGA TCAACTAATT
AATGATGCTG ATAAAGCTAT GTATCTAGCG AAGGAAAATG GTCGAAATCG AATTGAAGTA
CTCCCTGCAC CTAATCTGCA CTAA
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| Protein sequence | MNISLLQRIF FFTLSCCLLF VLLLGSVIWS SQAIELAFSR NHYAKQLTNQ TNTLKQLVAN
DNIYDSNYSI NDWQSLEVKL TALLKSSPKL TEQQLTIQNS LQSQNESLKN LFTLINKNKL
KNASEVIKTH LKAKLMTQLE AIRSEALHLS EIAQKDIYNT IQNQAVFIIT ISAVSILALL
FGAFTLTSIV RKSLTEVKCA FEKNHSGDYQ NIQLSHHSQE FDSIADAFNT MNEKLSESTI
SLTEMKKIVE ERTHVLEQLS RTDPLTKVAN RRALFERANM EFSRAMRSKN NLTLLLLDCD
FFKNVNDEFG HLFGDELLIH ICNICGQEIR DIDFLARYGG EEFIIVLPNC DIAGGIETAN
RIQNSLARHC VAIEDKEVCV TLSIGISMLS ERHKNLDQLI NDADKAMYLA KENGRNRIEV
LPAPNLH
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