| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0630 |
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| Symbol | speD |
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| ID | 3522106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 627757 |
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| End bp | 628515 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637283095 |
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| Product | S-adenosylmethionine decarboxylase |
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| Protein accession | YP_267380 |
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| Protein GI | 71281634 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1586] S-adenosylmethionine decarboxylase |
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| TIGRFAM ID | [TIGR03331] S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATACTG ATAACAAAAT CCCCCTGTAT GGCTTTAATA ATTTAACAAA AAGTTTAAGC
TTTTCGTTAT ATAGGGTATA TTATTTACCT TCAATTCAGT CCGTTGAGAG TTATAACACC
TACATCAATC GAACCTATAA CAGCGCACTG CTTGAAGTTC TGCTGACTAA AGTTTGTCAC
GCCATCGGTG GTAATGTATT AAATATAGCG AGCCAAGATT ACACCCCACA AGGAGCGAGT
GTAACTTTAA TGATTTCTGA AGAAGCAAAA CCAGAATCTT TAGTGGCTCA TCTAGATAAA
AGCCATTTAT GCATTCATAC CTACCCAGAA GAAACTGCAC AAAGTGGCAT AGCTATTTTT
AGAGCTGATA TAGAATTATC AACCTGTGGC ATTATCTCGC CCTTAAAAGT ATTAGATTAT
GTGATCGAGG CTTTTTCAGC GGATGTTATC GATATAGATT ATCGTATTAG AGGTATGACG
CGCGATCAAT ACGGTAAAAA GCACTTCAAT GATCATGAGA TTAGTCAAAT CAGTGAGCAT
TTAACCACAG ATACACTCGC AAAATACCAG GTTAAAGACA GTGTTATGAC AACACATAAC
TTGTTTCACT GTAAGCTAGC AAGACAGTCT ATTGAATTGA GACAACATAT TTTCAATCTT
GACTCTAACC TCGGTGAGCA TCAACTATCA GCTCAGGATG AAATACAAAT AAAAACACAA
CTAGCGATAG AATTAGATGA ACTTTTTATC GGTAAATAA
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| Protein sequence | MNTDNKIPLY GFNNLTKSLS FSLYRVYYLP SIQSVESYNT YINRTYNSAL LEVLLTKVCH
AIGGNVLNIA SQDYTPQGAS VTLMISEEAK PESLVAHLDK SHLCIHTYPE ETAQSGIAIF
RADIELSTCG IISPLKVLDY VIEAFSADVI DIDYRIRGMT RDQYGKKHFN DHEISQISEH
LTTDTLAKYQ VKDSVMTTHN LFHCKLARQS IELRQHIFNL DSNLGEHQLS AQDEIQIKTQ
LAIELDELFI GK
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