| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0574 |
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| Symbol | |
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| ID | 3518509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 573400 |
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| End bp | 574698 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637283039 |
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| Product | putative ABC transporter, permease protein |
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| Protein accession | YP_267324 |
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| Protein GI | 71278837 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAGTG ATAGTCTATT TGTTTATAAC CTCACTTTGG CAATGCAAAG CTTCAAGCGC
GCTCCTACTC TGTATTTTTT AATCATTCTG ACCTTGTCTA TTGGTGTTGG CGTATTGTGT
GCAAACCTTG CTTTAGTTAA CTCTATGGCA AGTGATCCCA TACCAGAAAA AAGTGCTCAT
TTATTTCATA TTAATATGAA TACTTGGCCT GATGATCAAC CACCTGATGA GCCTATGCAT
ATATTGCGCT ATAGAGATGC TATGGCGATC GCTGAATCAA ATCTAACTAA AGGCAGCGCA
ATATTTTATG CCTCTGGCGT TTATGCTAGG GATGCAGAGT CCAATAGTAT GAAACGTTTT
GATTCAGATG TGAGAGCCAC TACTCCAGGT TTCTTTGAAC TCACTAATGC ACCTTTTGCT
TATGGAGCGG CATTTGAAAA AAGTAGAGGT ATGGAAATAG TTATTGGTGA TGAATTAAAC
CAAAAGATAT TTGCTGGTAA AAACAGTGTG GGTAAAACAC TCGAGCTTGA TGGTGAATTA
CTTACGATTG TGGGTGTTTT GAAACCTTGG GTATTACGTC CCTTGTTTTA CCATCCGACA
GAGCGACGAG CCTTTAACTT AACCGATGAT ATATTTGCGC CACTTGAAAC CGCAATAGAT
TTAGGTTGGT CGATACATGC GCGCAGCTCC TCTGCAGTTG ATTATACTGG CATTGAAGAA
ACGCGTGATA AAGATGTTTA TTACTTACAA GCGTGGGTTG AGTTGGAAAA TGTGAATCAA
AAGCCAGCAT TGCAAAGCTA CTTAGATAAC TATAGCCAAC AACTTAAAGA TGCTGGGGAA
CATCCTTTAG CAATAAAAAA TGAACTACAT AATGTTAATG AGTGGCTAAA AGTGAATAAG
GTTGTAGATC AAAAGGTATT GGCATTTACT TTAGCTTCGG TTTTGTTTTT GTCTGTCTGT
ATTTTCAATG CCAGTAGTTT ATTACTTTCA CGCTTTCATG CAGCAAAATT TGAAGTGGGT
TTAAGACGTG CTATTGGTGC GAGTAACCGA CATATGCTGG TGCAGGGTTT AACTGAGAGT
GTGTTATTAG GCTTATTTAC TGGTGCGGTA GCGTTAGTGT TGAGTTGGTT GTTTCTAAAG
TTATCAGTGC AATTTTTACC ACGCTTAGCA AATATCGCTG TTTTAGAACC CAAGTTACTC
GTACTAGGGA TGTTGTTGGC ATTAGTGACT TCAATTGCCA GTGCTCTGTA CCCGTTATAT
CGCGCTAATC GTTACAGTAT TTCTGCTGAA CTTAAGTAA
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| Protein sequence | MRSDSLFVYN LTLAMQSFKR APTLYFLIIL TLSIGVGVLC ANLALVNSMA SDPIPEKSAH
LFHINMNTWP DDQPPDEPMH ILRYRDAMAI AESNLTKGSA IFYASGVYAR DAESNSMKRF
DSDVRATTPG FFELTNAPFA YGAAFEKSRG MEIVIGDELN QKIFAGKNSV GKTLELDGEL
LTIVGVLKPW VLRPLFYHPT ERRAFNLTDD IFAPLETAID LGWSIHARSS SAVDYTGIEE
TRDKDVYYLQ AWVELENVNQ KPALQSYLDN YSQQLKDAGE HPLAIKNELH NVNEWLKVNK
VVDQKVLAFT LASVLFLSVC IFNASSLLLS RFHAAKFEVG LRRAIGASNR HMLVQGLTES
VLLGLFTGAV ALVLSWLFLK LSVQFLPRLA NIAVLEPKLL VLGMLLALVT SIASALYPLY
RANRYSISAE LK
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