Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0524 |
Symbol | |
ID | 3519295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 520948 |
End bp | 521718 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637282989 |
Product | hypothetical protein |
Protein accession | YP_267282 |
Protein GI | 71279210 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism [T] Signal transduction mechanisms |
COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.149982 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAT ATTCAATTGC CAAACATTTC AATAAGTATT TCAAAATAAG ATTTGCTGAT ACTAAAGCGT TGCGACAAGC TGCATTTAAT ATTCGTTATG GAGTTTACAG TAGTGAGCTC GGTTGGGAGC CTGAAAATGA GCTCAAAATA GAAACAGATG CATACGATGA TTACGCTTTT CATTGCTTGC TAGAACATCG CCGTACTGGA ACCTTTGCCG GGTGCATTAG GCTCGTTATT CCACCAGTCA GCCAACCTAA CTTCCAATTA CCGTTTGAAA AAAACTGTTT ACATTCTGCC CTACCTGAAA TAATTGACTC AACAACCCTC AAACGCGGCA GTTTTGGTGA AATATCTCGT CTTGCCGTAT TAGCCTCTTT TAGACGACGA GAAAAAGAAA AAAGCAAACC ATTTATCATT AATGAAATTA ATCCTGAGAC GGTTTATACT GAAGATGAAC GGCGAAATTT CCCCAATATT GCTATGGGCC TTTATTTAGC GGGTTTATCT CTAGCGAGTT TATGTAATCA TGTAGGATTA TTTGTCATGA TGGAACCTCG TTTAAACAGA CGTTTGACCC GTTTTGGCCT GCCTTTTGAA CAAGCTGGCG AGGCAATGGA CTATCATGGC CAGCGCGCTA TGTTTTATCT TGAAAAAGAA GGGTTTAGTC TAAATTTAAC TGAAGAATTA AAAGACCTTT ATACCATTAT ACATAATGAT ATTTGCCAAC AAATATCATT CATACCTTAT ACCAATCCAG CGGAAAAATA A
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Protein sequence | MSEYSIAKHF NKYFKIRFAD TKALRQAAFN IRYGVYSSEL GWEPENELKI ETDAYDDYAF HCLLEHRRTG TFAGCIRLVI PPVSQPNFQL PFEKNCLHSA LPEIIDSTTL KRGSFGEISR LAVLASFRRR EKEKSKPFII NEINPETVYT EDERRNFPNI AMGLYLAGLS LASLCNHVGL FVMMEPRLNR RLTRFGLPFE QAGEAMDYHG QRAMFYLEKE GFSLNLTEEL KDLYTIIHND ICQQISFIPY TNPAEK
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