| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_C0021 |
|---|
| Symbol | |
|---|
| ID | 4206694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008265 |
|---|
| Strand | - |
|---|
| Start bp | 19910 |
|---|
| End bp | 20371 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | |
|---|
| Product | probable sigma factor |
|---|
| Protein accession | YP_699949 |
|---|
| Protein GI | 110804038 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 77 |
|---|
| Plasmid unclonability p-value | 0.535905 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCAA CTAAATTTAA TAAAGAGAAA GAAGAGTATA GAGAAGTAGA AGATATATTA
AAAGGATATA GAGATCTATT AGATAGAATA GAAACTATAA AAGAAGAGAT GAGAGAACTT
AAAGAGTTTT ATTTAGGATG CGGAGCAATA GAATATGGAG AATGTACGGG ACCAACTTAT
AAATTTAATA GCAGCGTAGA AAATGAGGTT GTTGATAAGG AGAAGAGGTT GGCACAGCTT
AATATTGAGT TAACTAGATG TACTATATTA AAAAATAGAA TAGATAATGC TGTAAGTAAA
TTAGAAGATG TAGATAAAAA AGTAATAGAG TATAGATATA TAAATAAAAG AAGCCTAGGC
TGGAAAGAAA TCGCTTTTGC AATAAACTAT AGTGAAAGCC ATTGCAGGAA TAGAATTAAG
CCGAGAGCGA TTAAAAGTAT GATTAGACAT ATAATCTATT AA
|
|---|
| Protein sequence | MEATKFNKEK EEYREVEDIL KGYRDLLDRI ETIKEEMREL KEFYLGCGAI EYGECTGPTY
KFNSSVENEV VDKEKRLAQL NIELTRCTIL KNRIDNAVSK LEDVDKKVIE YRYINKRSLG
WKEIAFAINY SESHCRNRIK PRAIKSMIRH IIY
|
|---|
| |