Gene CPR_B0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_B0006 
Symbolres 
ID4206642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008264 
Strand
Start bp6089 
End bp6658 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content30% 
IMG OID642567238 
Productresolvase 
Protein accessionYP_699925 
Protein GI110804012 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones178 
Plasmid unclonability p-value0.00548662 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGTTG GATATGCAAG GGTTAGTACT GAAGAACAAA GTTTAAATAG ACAAATCGAT 
ATGTTAATTG ATTATGGTGT AGATAAGAGA AATATATATC AAGAAAAAAT AAGTGGAATG
AAATCTAATA GAGAGCAGCT AGATAAAATG ATATATGAAC TACAAGCAGG AGATACAGTT
ATAATTACTG ATTTGACCAG AATATCAAGA AGTACAAAGG ATTTACTTAA TATTATAGAT
AGAATAAAAG CTAAAGGAGC TAGTATAAAA AGTATTAAAG ATACTTGGCT AGATACATCA
AGTGATAATC CATATAATAG TTTTTTACTA ACTGTTATGA GTGGATTGAG TCAATTAGAG
AGGGACTTAA TAAGTCAAAG GACTAAAGAA GGTTTAAAAA GCGCAAAAGC TAGGGGAAGG
AATGGAGGAA GGCCTTCCAA GAGAAATGAT AAAGCCCATA CAGTAGGGTT ACTATATAGG
GAAGGTTATA AAATAGTTGA TATAGTAAAA CAAACGGAAT TAAGTAGAGC AACTGTATAT
AGAGTGCTAA ATGATTTAAA ATTAAAATAA
 
Protein sequence
MLVGYARVST EEQSLNRQID MLIDYGVDKR NIYQEKISGM KSNREQLDKM IYELQAGDTV 
IITDLTRISR STKDLLNIID RIKAKGASIK SIKDTWLDTS SDNPYNSFLL TVMSGLSQLE
RDLISQRTKE GLKSAKARGR NGGRPSKRND KAHTVGLLYR EGYKIVDIVK QTELSRATVY
RVLNDLKLK