Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_A0001 |
Symbol | |
ID | 4206632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008263 |
Strand | + |
Start bp | 1237 |
End bp | 1677 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 21% |
IMG OID | 642567223 |
Product | hypothetical protein |
Protein accession | YP_699910 |
Protein GI | 110804002 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 445 |
Plasmid unclonability p-value | 0.00000000284269 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTAATT TATATAATGA ATTTTTAAAA TATGAATACA ATGAATTACA AGAGCTGTTT AAAATGGCTA GAAGTAAAGA AGAACAGGAC TTCTATATGG CATTATGTAA CTTTAAATTA CAGAAAGAAC AAAAGAAAGT TATTGGAAAT GATTTTGAAA TGGAGTTAAC ATTAAATGAA ATATTAAATT GGGTTAAGAG TGAAAGGCTT AGATTAAATC TACCAGATAG TAAGACTTTT TATTTTTCAA ATGAAAAAAG TAATGATAAT TATGATCTTA AAATATTTAA ATGTTTTAGT TCTGATAAAG ATATTAAAAG TTTAAAGGAT ATAATAAGAG CTGAAATAGA AAGTGTTAAT AATGAATATA GTATTTGTAA AATAATAATA GATGTAAGAT TTGGATCATT AACTTTTTAC TTTAAGAATA AAAAAATATA A
|
Protein sequence | MFNLYNEFLK YEYNELQELF KMARSKEEQD FYMALCNFKL QKEQKKVIGN DFEMELTLNE ILNWVKSERL RLNLPDSKTF YFSNEKSNDN YDLKIFKCFS SDKDIKSLKD IIRAEIESVN NEYSICKIII DVRFGSLTFY FKNKKI
|
| |