Gene CPR_2565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_2565 
Symbol 
ID4205573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2791484 
End bp2792536 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content28% 
IMG OID642567115 
Producthypothetical protein 
Protein accessionYP_699812 
Protein GI110802809 
COG category[S] Function unknown 
COG ID[COG3949] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTA TTATAAAAGT TTTTCAAGTA GCTTTTGTTT TTATAGGAAC TATAGTAGGA 
GCTGGACTTG CCTCTGGAAA GGAAATAACA AATTTCTTTA CAGTGTATGG ATATAAAAGC
TTTTTTACTA TTATAATGAC TGGTTTATTT TATATTTTTC TTTGTAACAT AATTTCAAGA
ATAAGCATTA AACATAGTTT AAATTCCTAT AGCGAAGTCA TAAATACAGT TAGTCCTAAT
ATTTTAGGAA AACTCACTGG AATCATAACA ACCTTTTACT TAATATCTAG TGCGTCAATA
ATACTAGCTG GTAGCGGAGC CTTGTTGAAT CAATACTTTG GAATTCCTAA TATTATAGGT
TCGATATTTA TGGCTATTAT TGCTTCGCTT ATTCTTATGA GAGAAACTGA TGGATTAGTA
GAGATAAATT CTATCATTGT TCCATCCTTA ATAATAGTAA CAACTACGCT TATGATTCTT
TATGTTACAT TTGCTAATGA CCCAATTACT ATAGGTTCTC TTGTTTCTTC TACTCCAAAA
CTTTCTAAGG GAGTTTTTAC TTCTGGAATA CTTTATTGTG GTTATAACAT TCTTTGCTGC
TGCGGGGTTA TTGTTCCTTT AAGTAACGAA ATAAAAAGTA AAAAAATCAT GACCTGGGGA
ATTATATTAG GTTCAGTTCT TCTAACAATA ATATGTATTT TTATTAATTC AATGCTTATG
GTTAATCAAC CACAAATATT CCAATACGAA ATTCCTCTAC TTTATATTGC TGATAGATTT
GGAAAGCCTA TTCAAATAAT GCTTTTAATA ATAATATTAT CTGAAATGTT TTCTACAGAG
GTTTCTGATG TATATTCTAT AAGTAAAACT CTTACTAAAA TCTTTAAAAT AAAATATAAA
CATGCCATAT TTGCAGTTTT AATAGTAGCA CTTCCAATTT CATTAATAGG ATTTTCAAAC
TTAATATCCA CATTATACCC AATGTTTGGA GTTTTAAGCT TAGTATTTAT AGCTCAATGT
ATTTACTTCT ACTTTTTTAA ATTAAAAAAA TAA
 
Protein sequence
MKSIIKVFQV AFVFIGTIVG AGLASGKEIT NFFTVYGYKS FFTIIMTGLF YIFLCNIISR 
ISIKHSLNSY SEVINTVSPN ILGKLTGIIT TFYLISSASI ILAGSGALLN QYFGIPNIIG
SIFMAIIASL ILMRETDGLV EINSIIVPSL IIVTTTLMIL YVTFANDPIT IGSLVSSTPK
LSKGVFTSGI LYCGYNILCC CGVIVPLSNE IKSKKIMTWG IILGSVLLTI ICIFINSMLM
VNQPQIFQYE IPLLYIADRF GKPIQIMLLI IILSEMFSTE VSDVYSISKT LTKIFKIKYK
HAIFAVLIVA LPISLIGFSN LISTLYPMFG VLSLVFIAQC IYFYFFKLKK