Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2281 |
Symbol | sipW |
ID | 4205819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2504819 |
End bp | 2505319 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642566832 |
Product | signal peptidase I |
Protein accession | YP_699556 |
Protein GI | 110802754 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02228] signal peptidase I, archaeal type |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAGTA AAAAGATTGT TAATACTATA TATTACATAG TTATTTCTAT GTTAGTTATA ATATTAGTAA ATAATTTTAT GAGTAAGTCA GATTCAATAT TTAAAGCTGT TGGATTTAGA ACATATTCAA TATTAAGTGG AAGTATGGAA CCAGAGATTA ATACTGGAGA TCTAGCTATT GTTAAGAGTG TTTATGCTGA GGATGTTAAA GTTGGAGATA TAATAACATT TAAATATGAG GGGAAAGTAG TTACCCATAG AGTTGTTGAA AAAAATGAAG AGGGATTTAT AACAAAGGGT GATAATAATA ATACTAATGA TACTGAAATA GTTAGAGGAG AAGACTTAAT AGGAAAAGTT TTATTTCATA TGCCTTTCTT AGGATATGTT ACAGTATTTT TATCAAAGCC AATAGCAATA TCAGGACTTA TGGTATTAAT CGCAATAAGC ATACTTTGGG ATACTTTTAA AGTTGATAAG AAAAAAGTAA TAAAGGCTTA G
|
Protein sequence | MNSKKIVNTI YYIVISMLVI ILVNNFMSKS DSIFKAVGFR TYSILSGSME PEINTGDLAI VKSVYAEDVK VGDIITFKYE GKVVTHRVVE KNEEGFITKG DNNNTNDTEI VRGEDLIGKV LFHMPFLGYV TVFLSKPIAI SGLMVLIAIS ILWDTFKVDK KKVIKA
|
| |