| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2139 |
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| Symbol | secA |
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| ID | 4205125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2370144 |
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| End bp | 2372681 |
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| Gene Length | 2538 bp |
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| Protein Length | 845 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642566689 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_699446 |
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| Protein GI | 258676975 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGGGATA TTATAATGGG ATTATTTGAT AAAATATTTG GAAGTTATAG CGATAGAGAA
GTTAAGAGAA TAACACCTAT TGTAGACAAA ATAGATTCAC TTGGGCCTGA AATGGAAAAA
CTATCTGATG AAGAATTGAA GCAAAAAACA TTTGAATTTA AGGATAGATA TGCTAAAGGA
GAAAGCTTAG ATGATATGCT TCCAGAAGCT TTTGCTGTTT GTAGAGAAGC ATCAACAAGA
GTTTTAGGAA TGAAACACTA TAGAGAGCAA TTAATTGGTG GTATAGTTTT ACACCAAGGA
AGAATAGCAG AAATGAAAAC TGGTGAAGGT AAAACATTAG TTGCTACTTT ACCTGTTTAT
TTAAATGCTA TAGCTGGTAA AGGTGTTCAT GTAATTACAG TTAATGATTA TCTTGCAACA
AGAGATAAAG AGTGGATGGG GCAATTATAT GAATTCTTAG GATTAACTAC TGGGGTTATA
GTTCATGGAT TAACTAATGA CCAAAGAAGA GAAGCATATA ATGCGGATAT AACTTATGGA
ACAAATAATG AATTTGGATT TGATTATTTA AGAGATAACA TGGTTATTTA TAAAGAAGAA
AGAGTTCAAA GACCGTTACA CTACTGTATA GTGGATGAGG TTGACTCAAT TCTTATAGAT
GAAGCAAGAA CTCCTCTTAT AATTTCAGGT GCAGGAAGTA AATCAACAGA TCTTTATAAG
ATAGCTGATT TCTTTGTTAA GAAACTAAGA GAAGAAGAAG ATTATACAAT AGATGAAAAA
GCACATGCTG CAATGCTTAC TGACAAAGGA GTTGCAGAGG CAGAAAAGGC TTTTGGAATA
GAAAACTACG CAGATGCTAA TAATATGGAA TTACAACATC ATATTACTCA AGCCTTAAAA
GCTAACTATG TAATGAAAAG AGATAAAGAT TACATGGTTA AAGATGATGA AATAGCTATA
GTTGATGAAT TTACAGGAAG ACTTATGGAA GGTAGAAGAT ATTCAGATGG TCTTCACCAA
GCCATTGAAG CTAAGGAAGG TGTTAAAGTT CAAAGAGAAT CTAAGACTTT AGCAACTATA
ACATTCCAAA ACTATTTCAG AATGTATACT AAATTAGCAG GTATGACAGG TACTGCGCTT
ACTGAGGAAA CTGAATTTAG AGAAATATAT GGATTAGACG TTGTTGTTAT TCCAACTCAT
AGACCAGTTC AAAGACAAGA CCACTCAGAT TTAGTATTTA AAACAGCTAA GGGAAAATAT
GATGCCATAG TGGAAGAAAT AATAGAAACT CATAAGACAG GTCAACCAGT ATTAGTTGGT
ACAACTAGTA TAGAAAAATC AGAATATCTT TCATCTTTAT TAAAGAAAAA AGGTGTTCCT
CATAAGGTTT TAAATGCTAG GTATCATGAA CAAGAAGCTG AAATTGTATC TCATGCAGGT
GAGTTAGGTA ACATAACAAT TGCAACTAAC ATGGCTGGTA GAGGTACTGA TATTAAACTT
GGAGAAGGTG TTTTAGAAGT TGGTGGTTTA AAAATCATAG GTACTGAAAG ACATGAGTCA
AGAAGAATAG ATAATCAGCT TAGAGGACGT TCAGGTCGTC AAGGAGATAA AGGGCATTCA
AGATTCTATA TCTCTTTAGA GGATGATTTA ATGAGAATAT TTGGCTCAGA AAAACTTCAA
GCTGTTGTTG ATAGATTAGG ATTAGAAGAA ACTGAGGCTA TTGAAAGTAA AATGGTTACT
AAATCAATAG AAAATGCTCA AAAGAAAGTA GAAGGTAATA ACTTTGATAT AAGAAAAACA
TTGTTAGGAT ATGATGATGT TATGAATAAA CAAAGGGAAG TTATCTATAA GCAAAGATCA
CAAGTTTTAG AGGGTGAAAA CTTAGAAGAC AGCGTTCAAG CTATGATCGA AGATGTTATA
ACTAATGCTG TTCAAGCTCA CTTAGGAAAT ATTGATGAAG ATGATTTTGA AAAAGAACTT
GGAGATTTAA TAAAATACTT AGAAGATATA ATGTTACCAC ATGGTAAATT CACTGTAGAA
GAATTAAAAA CTAATTCAAA TGAAGAAATT ACTAGAAAAT TCATTGAATG TGCTAGAGAA
ATCTACAAGG AAAAGGAAGA GTTCGTTGGC TCAGAGCAAA TGAGAGAAAT AGAAAGAGTT
ATAATCTTAA GAGTTGTTGA CACTAAGTGG ATGGATCACA TAGATGATAT GGATCACTTA
AAACAAGGTA TTGGATTAAG AGCATACAAA CAACAAGATC CAATTCAAGC TTACCAAATG
GAAGGTAGTG CTATGTTTGA TGAAATGATA AATAATATAA AGATAGACAC AGTAAGATAC
TTATTCCATG TAAAAGTTGA GGCTGAAAAA CCTCAAAGAG AGAGAGTTGC TAAGGAAACA
GGAGCAAGTC ATGGTGGAGA CTCTCAAGAA ATAAAGAAAA AACCAGTTAA AAAAGAGCCT
AAAGTAGGTA GAAATGATTT ATGTCCATGT GGAAGTGGAA AAAAATATAA ATCATGTTGT
GGAAGAGAAG TAGTTTAA
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| Protein sequence | MRDIIMGLFD KIFGSYSDRE VKRITPIVDK IDSLGPEMEK LSDEELKQKT FEFKDRYAKG
ESLDDMLPEA FAVCREASTR VLGMKHYREQ LIGGIVLHQG RIAEMKTGEG KTLVATLPVY
LNAIAGKGVH VITVNDYLAT RDKEWMGQLY EFLGLTTGVI VHGLTNDQRR EAYNADITYG
TNNEFGFDYL RDNMVIYKEE RVQRPLHYCI VDEVDSILID EARTPLIISG AGSKSTDLYK
IADFFVKKLR EEEDYTIDEK AHAAMLTDKG VAEAEKAFGI ENYADANNME LQHHITQALK
ANYVMKRDKD YMVKDDEIAI VDEFTGRLME GRRYSDGLHQ AIEAKEGVKV QRESKTLATI
TFQNYFRMYT KLAGMTGTAL TEETEFREIY GLDVVVIPTH RPVQRQDHSD LVFKTAKGKY
DAIVEEIIET HKTGQPVLVG TTSIEKSEYL SSLLKKKGVP HKVLNARYHE QEAEIVSHAG
ELGNITIATN MAGRGTDIKL GEGVLEVGGL KIIGTERHES RRIDNQLRGR SGRQGDKGHS
RFYISLEDDL MRIFGSEKLQ AVVDRLGLEE TEAIESKMVT KSIENAQKKV EGNNFDIRKT
LLGYDDVMNK QREVIYKQRS QVLEGENLED SVQAMIEDVI TNAVQAHLGN IDEDDFEKEL
GDLIKYLEDI MLPHGKFTVE ELKTNSNEEI TRKFIECARE IYKEKEEFVG SEQMREIERV
IILRVVDTKW MDHIDDMDHL KQGIGLRAYK QQDPIQAYQM EGSAMFDEMI NNIKIDTVRY
LFHVKVEAEK PQRERVAKET GASHGGDSQE IKKKPVKKEP KVGRNDLCPC GSGKKYKSCC
GREVV
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