Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2123 |
Symbol | |
ID | 4204405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2351412 |
End bp | 2353199 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642566673 |
Product | MutS domain-containing protein |
Protein accession | YP_699432 |
Protein GI | 110801595 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAATA GAAAAGATAT TTATGAAAAA AGAATAGAAG AGTATTCAAG TGCTTTAAAG AGATTAAAGA GAGACTATAA TATAATCAGC GCATTAAGAT TAGTAGTTTC TTTAAGTATT TTATTTTTTA TTTACTACGC TTATAGCATA GGCTCAATAA GCTTTGGGAT CATATTATTT TTGCTAAATT CTATATTATT TTTATATTTA GCAAAGGTTC ATGAAGGTAT AGTGAATAAA ATAAGTAAAA GAGAAGCTCT TATAGAGGTT AATAAAAAAG AGATTCTTAG GTTAGAGGGA AAGTGGAGAG AATTTAATGA TTTAGGAGAA GAATATTTAG ATAATAAGCA TCCTTTTATA AATGACTTAG ATATATTTGG GAAAAACTCT TTATTTCAAT GGATAAATGA AACTGGTACT GTTTATGGAA GAGAGAAATT AAGCCATTTA TTAAAGTTAG AAGAACTTCC AAATAAAGAA GAAATTTTAT TAAGACAGGA AGCTTTAAAG GAGCTTTCTA AAAAAGTAGA TTTTAGACAT GAATTTATAG CTTCATTAAA AGATAAAAAA GGAAAAAAAG AGAAGTATTT AGGGGAATGG TTAAAAGAAG ACAGTAAAGC CATATCGCCT TTATTAAATA TTCTTAGAAT AATAATGCCA GTAATAAATA TTGGAATTAC TATTTTAGTT GGTATGAATG TTATTTCATG GCAAATACTA TTAATTTCTC TTGTTATAAG TTATGGTATT TTGAAGCTTG GCAATAAGGA AGTTATTAAA GGATTAAATA TATTTGAAGA TTTAAAATAT AGAATAAAAA CCTATGTAGA GGCTTTAGAG TTAATAGAAA AAGAGAATTT CCAGTCTAAT ATAATAAAAA GTATAAAAAG TAACTTAGAT ATGAATGGCA AAAGTGCTAG TAAGGAGCTT AAAAGCTTAG AAAAGATAAC TAGCTGGCTT TATGATAGGG GAAATGCCTT TTATCTTTTA TTAAACTGTT ATTTGCTTTG GGATTATCAA ATTCTATCAA AGCTTGAAAA GTGGAAGAGT TCTAATAAAG ATGAGTTTTA TAAATGGATG ATTTCTTTAG GTGATTTTGA GGCTTTAGTT TCTTTAGCTG GATTTACTTA CAATAATCAT GGATGGGCTA CACCAAAAAT AAATGATGAC TATACTTTAA AGGGAAAAAA TCTTAGCCAT CCTATGTTAG GAGAAAAAGG CGTTGGAAAC AGTTTTGATA TTAATAAGGA TAAGAGAGTA ATCTTAATAA CAGGATCTAA TATGTCAGGT AAGAGTACAT TTTTAAGAAC TGTTGGATTT AATTGTATAT TAGCTTATCT AGGACTTCCT GTAAAAGGAG AAAGTTTTGA AGCTCCAATA TTAAAAGTTT ATACCTGTAT GAGAACTGGA GATAATCTTG AAGAGAGTAT ATCTTCATTT TATGCAGAGA TACTTAGAAT AAAGATTATA GTTGAGGGTG TAAAAAGAGG AGAAAAGATT TTATTTTTGT TAGATGAAAT ATTTAAAGGA ACAAACTCCT TAGATAGACA TGAGGGAGCG GAGATATTAA TAAATCAGCT TTTAGAAGGA AACACATTAG GATTAGTTTC AACTCATGAT TTTGAACTTT GCGATATGGA GAAAAAAGAT TCTACTATAC AAAATTATAA TTTTAGAGAA TATTATGAGG ATAATAAATT AAAGTTTGAT TATATTTTAA GAAAAGGTGT TTCACAAACA AGAAATGCTA GATATTTAAT GAAGATGGCT GGAATAGATA TTGAATAA
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Protein sequence | MENRKDIYEK RIEEYSSALK RLKRDYNIIS ALRLVVSLSI LFFIYYAYSI GSISFGIILF LLNSILFLYL AKVHEGIVNK ISKREALIEV NKKEILRLEG KWREFNDLGE EYLDNKHPFI NDLDIFGKNS LFQWINETGT VYGREKLSHL LKLEELPNKE EILLRQEALK ELSKKVDFRH EFIASLKDKK GKKEKYLGEW LKEDSKAISP LLNILRIIMP VINIGITILV GMNVISWQIL LISLVISYGI LKLGNKEVIK GLNIFEDLKY RIKTYVEALE LIEKENFQSN IIKSIKSNLD MNGKSASKEL KSLEKITSWL YDRGNAFYLL LNCYLLWDYQ ILSKLEKWKS SNKDEFYKWM ISLGDFEALV SLAGFTYNNH GWATPKINDD YTLKGKNLSH PMLGEKGVGN SFDINKDKRV ILITGSNMSG KSTFLRTVGF NCILAYLGLP VKGESFEAPI LKVYTCMRTG DNLEESISSF YAEILRIKII VEGVKRGEKI LFLLDEIFKG TNSLDRHEGA EILINQLLEG NTLGLVSTHD FELCDMEKKD STIQNYNFRE YYEDNKLKFD YILRKGVSQT RNARYLMKMA GIDIE
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