Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2050 |
Symbol | |
ID | 4204040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2271261 |
End bp | 2272217 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642566600 |
Product | sugar transport system (permease) (binding protein dependent transporter) |
Protein accession | YP_699359 |
Protein GI | 110801447 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTAGAAA CTATTAAACA AAAAAGACTT CAGAAAAAAG CTGAACCAAA AGAAGAAGTA AACAAGTTTA ATGCTGTCTC AAAAAAGAGT AACTTTTTAT TAAATGTTTT ATTCGCAATA TTAGCTTTCT TAGCAATAAT GCCCTTCATA TTTGTTATAG CTATATCATT AACAAATGAG CAATCATTAC AATTAAATGG ATATAGATTC ATACCAGAAG AGTGGAGCTT AGAAGCTTAT AAATATATAT TCTCATCAGG TAGTCAGATT TTAACATCAT ATGGGGTTAC AATTACTGTT ACAATTTTAG GTACTTTAAT TGGACTAGCT ATAATGTCAA TGTATGGATA TGCTTTATCA AGAAAGAGCT TTGCTTACAG AAAGTTCTTT ACTAAAGTAA TATTTGTACC AATGTTATTC TCAGGTGGTA TGGTTGCTTC ATACCTAGTA GTTACAAGAT TTTTAGGATT AAAGAATACA ATATGGGCTC TTATACTTCC AATGTGTGTA AGTTCATTCC ATATAATTAT TTTAAGAACA TTCTTTAAGA CATCAGTACC AGACGCTATT ATAGAATCAG CTAAAATAGA TGGAGCATCA GAGTGGAGAT TATTCTTAAG AATAGTATTA CCAATCTCTC TTCCTGGTAT AGCAACAATA GGATTATTCT TAACTTTAGG ATACTGGAAT GACTGGTTCA ATGCTATGTT ATATATTGAT GAACCAAACT TAATACCATT ACAGTACTTA TTAATAAGAC TTGAAAACTC AATGGAGTTC TTAGCAAATA ATGCAACATC ACTTGGTGCA AATGCTATAG AGGCTACTAA GAACATGCCA AAAGATACTG CTAAGATGGC TATAGTTGTT ATTTCAACTT TACCAATTAT ATTTGCTTAT CCATTCTTCC AAAGATACTT TGTAAATGGA TTAACAATTG GAGCAGTTAA AGAGTAA
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Protein sequence | MLETIKQKRL QKKAEPKEEV NKFNAVSKKS NFLLNVLFAI LAFLAIMPFI FVIAISLTNE QSLQLNGYRF IPEEWSLEAY KYIFSSGSQI LTSYGVTITV TILGTLIGLA IMSMYGYALS RKSFAYRKFF TKVIFVPMLF SGGMVASYLV VTRFLGLKNT IWALILPMCV SSFHIIILRT FFKTSVPDAI IESAKIDGAS EWRLFLRIVL PISLPGIATI GLFLTLGYWN DWFNAMLYID EPNLIPLQYL LIRLENSMEF LANNATSLGA NAIEATKNMP KDTAKMAIVV ISTLPIIFAY PFFQRYFVNG LTIGAVKE
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