Gene CPR_2044 details

Gene Information

• Locus tag: CPR_2044
• Symbol: ytaF
• ID: 4206071
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 2261899
• End bp: 2262507
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 642566594
• Product: putative sporulation protein YtaF
• Protein accession: YP_699353
• Protein GI: 110803860
• COG category: [S] Function unknown
• COG ID: [COG1971] Predicted membrane protein
• TIGRFAM ID: [TIGR02840] putative sporulation protein YtaF

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCTTTT TAAGTATACT TCTTTTTGTA ATTGCTGCAA GTTTAGATAT ACTTGTTGTT 
TCTTTAGCAT ATGGTTTAAA AGACATAAAA ATAAATTTTT CAAGTACCCT TGTCATAGCA 
TCCATATCTG CTTTAGGAAC TTTTATTTCA ATGATACTTG GAAAATTTTT AGTGGATTTA 
ATTCCTATTA AATTAGGAGA TATTATAGGT GGTTTAGTTC TTCTTTTATT AGGTTTTTAT 
TCTATATATT CTTATTTCAA AGAGAAAAAA ATCCTAACCT CACATAATAG TGAGAATGAT 
TCCTCTCCCA CCTTTATATT AGAAAACCCA GAAGTTGCAG ATAAAGATAA GTCTGGTAAT 
ATTGATTTTA AAGAATCCCT AGCCTTATCC TTAGCCCTAG CTTTAAACAA CTTTGGTTTA 
GGAATAGGTG CTAGCATCTC TGGACTCAAT ATTGCCTTTA CAACAATATC AACCTTTATT 
ATTTCATTGA TTTTTATCTC CTTAGGCTTC TATTTATCAA AAACAATAAA AAGTAAAAAT 
ATTTCAAAAA ATAGTAACTT AATTGCAGGA ATAATAATCA TCATATTATC ACTATTTATT 
ATTTTTTAG 

 

Protein sequence

MSFLSILLFV IAASLDILVV SLAYGLKDIK INFSSTLVIA SISALGTFIS MILGKFLVDL 
IPIKLGDIIG GLVLLLLGFY SIYSYFKEKK ILTSHNSEND SSPTFILENP EVADKDKSGN 
IDFKESLALS LALALNNFGL GIGASISGLN IAFTTISTFI ISLIFISLGF YLSKTIKSKN 
ISKNSNLIAG IIIIILSLFI IF