Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2013 |
Symbol | gpr |
ID | 4205316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2220001 |
End bp | 2220978 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642566563 |
Product | germination protease |
Protein accession | YP_699322 |
Protein GI | 110803194 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01441] GPR endopeptidase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTACAATG TAAGAACTGA TTTAGCTGTT GAAAGTAGAG AGATTTATAA ACATAGATAT AATAGGGAAA TTGATGGGGT AGTTTTTGAA GAAAAGACTG TGGAAGAGGA TATTAAAGTT ACAAATGTTG ACATATTAAA TGAGGAAGGC GCTAAAGCTA TGGAAAAACC TATAGGCAGA TATGTTACCA TAGATATCCC TGATTACACT CATTATGACG GTGGCATAAT GGATGAGGTT TCTCATGTGG TGGCAGCCTC CTTAGAAGAA CTTATTAATT TACCAGAGGA GAGAACGGCT TTAGTAGTTG GGCTTGGAAA CTGGAATGTT ACACCTGACG CCATAGGTCC TAAGGTTGTG GGAAAATTAA TGGTAACAAG ACATTTAAAG AAGGTTATGC CAGACATAAT AGATGATTCA GTAAGACCAG TTTGCGCCAT AGCACCTGGA GTTTTAGGCA TAACAGGAAT TGAAACTGGA GAGATAATAA AATCATTAGT GGAAAAAATA AAACCAGATT TAGTAGTTTG TATTGATGCC TTAGCTTCAA GAAAACTAGA AAGAGTGGCT AGAACCATTC AAATAAGCAA TACTGGAATA TCACCAGGGG CTGGAGTTGG AAATCATAGA ATGCAAATAA ATGAAGAAAG CTTAGGTATC CCTGTTATTG CCTTAGGAGT ACCAACTGTT GTGGATGCAG CTACTATTGC AAATGATGCC ATGGATTTAG TTTTAGATGA AATGATAAAT CAAGCAGATG CTGGCAAAGA GTTTTATAAT ATATTAAATA ACATAGATAA GAATGAAAAG GGAATGATGA TAAAGAGCCT TTTAGATCCT TATGTAGGAG ACTTAATGGT TACCCCAAAA GAAATAGACG ATATAATAGA GTCAGTTTCA AAAATAATAG CAAATGGAAT TAATATAGCC CTTCAACCTA ATATGGTGTT AGAGGATATA AATAAATTTT TAAACTAA
|
Protein sequence | MYNVRTDLAV ESREIYKHRY NREIDGVVFE EKTVEEDIKV TNVDILNEEG AKAMEKPIGR YVTIDIPDYT HYDGGIMDEV SHVVAASLEE LINLPEERTA LVVGLGNWNV TPDAIGPKVV GKLMVTRHLK KVMPDIIDDS VRPVCAIAPG VLGITGIETG EIIKSLVEKI KPDLVVCIDA LASRKLERVA RTIQISNTGI SPGAGVGNHR MQINEESLGI PVIALGVPTV VDAATIANDA MDLVLDEMIN QADAGKEFYN ILNNIDKNEK GMMIKSLLDP YVGDLMVTPK EIDDIIESVS KIIANGINIA LQPNMVLEDI NKFLN
|
| |