Gene CPR_1977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1977 
Symbol 
ID4204585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2184318 
End bp2185346 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content31% 
IMG OID642566527 
Productdeoxyguanosinetriphosphate triphosphohydrolase-like protein 
Protein accessionYP_699286 
Protein GI110802394 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0232] dGTP triphosphohydrolase 
TIGRFAM ID[TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.737339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA GAGAGAATAT TGAAAATTTT GAAAGAATAA AGTTAAATAA AGTCGCAAAG 
TTCTCAGATG AATCTGTAGG AAGAGAACGC TTAGAAGAAC CAGATGAGAT AAGAACCTGT
TTTATGGTAG ATAGGGATAG AATAATTCAT AGTAAATCTT TTAGAAGGTT AAAAAGAAAA
ACTCAGGTTT TCATAAGAAC CTATGGGGAT CATTATAGAA CAAGGCTTGT TCATACTTTA
GAAGTTTCTC AAGTAGCAAG AACGATAGGA GTAGCTCTAT CATTAAATGA ATATTTAATA
GAGGCTATTG CTTTAGGTCA TGATTTAGGG CATGCAGCTT TTGCTCATAT TGGAGAGGAT
GTTTTAAATG ATTTTCTTCC AGGTGGGTTT AAGCATAATG AACAAAGTGT TAGGGTAGCA
AAGAAAATAG AGAAAAATGG ATTAGGTCTT AATTTGACCA AAGAAGTTTT AGATGGAATA
TTAAATCATA GTGGTTTTTC AAATGTTAGT AAGGTAGCAG GAACTTTTGA AGGACAAGTA
GTTAGATTTG CAGATAAGAT AGCATATGTA AATCATGATA TAGACGATTC AATTAGAGCG
GGAATTTTGA AAGAAGAGGA TTTGCCTAAG AATATTATTG AAATCTTAGG TGCTAGTGGT
AGTGAAAGAA TAAACACTTT AGTTAAAGAT TGTGTTTTTA ATACAATTGA TAATATAGAT
AAAGGGGAAC CTAGGGTATC TTTAAGCAAA GAAATAGGAG ATGCCTTTGT TCAGCTTAGA
AAATTTTTGT TTGATAATAT ATATTTAGGG AAATACTTAG AGGATGAGAG GAAAAAAGCA
GAATTTATAC TAGAGAAGGT TATAGAGTAT TATTACAATA ATTGGGGAGA AATGCCTGAA
CTATATAGAA ATATATGTGA AGAGGAAGGA ATACATAGAG GGGTTACGGA TTACATTGCA
GGAATGACAG ATGATTACTG TACAAATGAA TTCAATAAAA TATATATTCC AAAGTTTGTG
ATGTATTAA
 
Protein sequence
MKIRENIENF ERIKLNKVAK FSDESVGRER LEEPDEIRTC FMVDRDRIIH SKSFRRLKRK 
TQVFIRTYGD HYRTRLVHTL EVSQVARTIG VALSLNEYLI EAIALGHDLG HAAFAHIGED
VLNDFLPGGF KHNEQSVRVA KKIEKNGLGL NLTKEVLDGI LNHSGFSNVS KVAGTFEGQV
VRFADKIAYV NHDIDDSIRA GILKEEDLPK NIIEILGASG SERINTLVKD CVFNTIDNID
KGEPRVSLSK EIGDAFVQLR KFLFDNIYLG KYLEDERKKA EFILEKVIEY YYNNWGEMPE
LYRNICEEEG IHRGVTDYIA GMTDDYCTNE FNKIYIPKFV MY