Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1974 |
Symbol | |
ID | 4204948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2180112 |
End bp | 2180999 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 642566524 |
Product | hypothetical protein |
Protein accession | YP_699283 |
Protein GI | 110801978 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0130729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAT TTAAGGCTAA AAGAGGCCAT GGCGTATTTG AAGTCTTTGC GTATCTTTTA TTGGGAAATG CACTATTAAT TATATTAAGT AACATAGTGA ATGGTTATTT AGAGAGAAAT TTAGTAATAG TATCAAGCTT TGTTTATAGC ATTGTATGCA TTTATTACAT TTTACTTGAT TTATCCTTAG TTTACGAAGT TAATGATGAT TACATTGAAA TAAATTGTTT TAAAGGATTA AAAAAATTTA GGATAAATTT TAAAGATGTA AATGGTTTTT TAGAACAAGA TAAAGTTATA AATGGATTTA AATTATCTGG TTTTGGAAAA CATAAATATT GTTTTGGTAG ATGTGTTGTT CATAATGTAG GAATTGCTCG TATGTTTGTA ACTTCTAGTA AGAGGGTTAT ATATATACAT ACAGAGGATA TAAGTTATGG ATTATCTCCA GATGAATTTG AAAAGTTTAA AGAGTTAATA GTATCAAAGG GAATAAAGGA AGAAAGTTTC AAGGTAAAAG TTAATAATGC AAGAGCAATA ATAAGGGATA AGGGATTTTA TATTCCTTTT ATAATAACAT CCTTATTAAT ATTAGGCATT ATACTAATAC CTTCTATATT ATATTTATCA GGAGCTATGC CTGATAAAAT GCCAATTGAT TTTAGTGCAC ATTTTATACC TTGTACTATT GGAAGTGCGA AGGATTTTGT AGGAAGACAA ATTATATATG GAATAATGAA TATGATTCTG TTAGTATGTA TTTATTATGC AAGTCATTTT TGTGCTAAAT ATGATAAAAA GTTAGCTCAA AGATATATTT ATTTGTCTTT AATAATATCA TTGGTGTTTT TGGTTTCTCA AATACAAACA CTGGTAAATT ATTTGTAG
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Protein sequence | MTKFKAKRGH GVFEVFAYLL LGNALLIILS NIVNGYLERN LVIVSSFVYS IVCIYYILLD LSLVYEVNDD YIEINCFKGL KKFRINFKDV NGFLEQDKVI NGFKLSGFGK HKYCFGRCVV HNVGIARMFV TSSKRVIYIH TEDISYGLSP DEFEKFKELI VSKGIKEESF KVKVNNARAI IRDKGFYIPF IITSLLILGI ILIPSILYLS GAMPDKMPID FSAHFIPCTI GSAKDFVGRQ IIYGIMNMIL LVCIYYASHF CAKYDKKLAQ RYIYLSLIIS LVFLVSQIQT LVNYL
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