Gene CPR_1974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1974 
Symbol 
ID4204948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2180112 
End bp2180999 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content26% 
IMG OID642566524 
Producthypothetical protein 
Protein accessionYP_699283 
Protein GI110801978 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0130729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAT TTAAGGCTAA AAGAGGCCAT GGCGTATTTG AAGTCTTTGC GTATCTTTTA 
TTGGGAAATG CACTATTAAT TATATTAAGT AACATAGTGA ATGGTTATTT AGAGAGAAAT
TTAGTAATAG TATCAAGCTT TGTTTATAGC ATTGTATGCA TTTATTACAT TTTACTTGAT
TTATCCTTAG TTTACGAAGT TAATGATGAT TACATTGAAA TAAATTGTTT TAAAGGATTA
AAAAAATTTA GGATAAATTT TAAAGATGTA AATGGTTTTT TAGAACAAGA TAAAGTTATA
AATGGATTTA AATTATCTGG TTTTGGAAAA CATAAATATT GTTTTGGTAG ATGTGTTGTT
CATAATGTAG GAATTGCTCG TATGTTTGTA ACTTCTAGTA AGAGGGTTAT ATATATACAT
ACAGAGGATA TAAGTTATGG ATTATCTCCA GATGAATTTG AAAAGTTTAA AGAGTTAATA
GTATCAAAGG GAATAAAGGA AGAAAGTTTC AAGGTAAAAG TTAATAATGC AAGAGCAATA
ATAAGGGATA AGGGATTTTA TATTCCTTTT ATAATAACAT CCTTATTAAT ATTAGGCATT
ATACTAATAC CTTCTATATT ATATTTATCA GGAGCTATGC CTGATAAAAT GCCAATTGAT
TTTAGTGCAC ATTTTATACC TTGTACTATT GGAAGTGCGA AGGATTTTGT AGGAAGACAA
ATTATATATG GAATAATGAA TATGATTCTG TTAGTATGTA TTTATTATGC AAGTCATTTT
TGTGCTAAAT ATGATAAAAA GTTAGCTCAA AGATATATTT ATTTGTCTTT AATAATATCA
TTGGTGTTTT TGGTTTCTCA AATACAAACA CTGGTAAATT ATTTGTAG
 
Protein sequence
MTKFKAKRGH GVFEVFAYLL LGNALLIILS NIVNGYLERN LVIVSSFVYS IVCIYYILLD 
LSLVYEVNDD YIEINCFKGL KKFRINFKDV NGFLEQDKVI NGFKLSGFGK HKYCFGRCVV
HNVGIARMFV TSSKRVIYIH TEDISYGLSP DEFEKFKELI VSKGIKEESF KVKVNNARAI
IRDKGFYIPF IITSLLILGI ILIPSILYLS GAMPDKMPID FSAHFIPCTI GSAKDFVGRQ
IIYGIMNMIL LVCIYYASHF CAKYDKKLAQ RYIYLSLIIS LVFLVSQIQT LVNYL