Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1899 |
Symbol | aspS |
ID | 4204102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2096359 |
End bp | 2098152 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642566449 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_699209 |
Protein GI | 110801685 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTGAAG CTTTAAATGG ATTAAAGCGT AACATAATGT GTGGCGACGC TAGAGAAAGC CATATTGGAC AAAAAGTAAC CGTAATGGGC TGGGTTCAAA GAAATAGAAA TCTTGGAGGT CTTCAATTTA TAGACTTAAG AGATAGAGAA GGAATTTTAC AGGTTGTATT TAATGATGAT TTAGGAGAAG AAATCCTAGA AAAAGCAAAA TCAATAAGAC CTGAATATTG TATTGCTGTA ACAGGTGAAA TAGTTAAGAG AGAATCAGTA AATCCAAACA TGCCAACAGG TATGGTTGAG TTAAAAGCTG AGGAATTAAA GATTTTATCT GAATCAGATA CTCCTCCAAT ATATATAAAA GAAGATTTAG ATGCTGCTGA AAGTATTAGA TTAAAGTATA GATACTTAGA TTTAAGAAGA CCAGATATGC AAAATATCTT CAAAATAAGA CATAAGACAA CTAAAGCAAT AAGAGATTAT TTAGATCAAA ATGGTTTCTT AGAAATGGAG ACGCCAATAC TTACAAAGTC AACTCCAGAA GGAGCTAGAG ATTATCTTGT TCCATCAAGA AACTATCCAG GAATGTTCTA TGCATTACCT CAATCACCAC AATTATTTAA ACAATTATTA ATGGTATCAG GTTTTGATAG ATACTTCCAA ATAGTTAAGT GTTTCAGAGA TGAGGACTTA AGAGCTAACA GACAACCAGA GTTTACTCAA GTTGACTTAG AAATGTCATT TGTTGAGCAA GATGATGTTA TGGCTTTAAA TGAATGTTTA ATAAAACATG TATTTAAAGA AGTTTTAGGA GTAGATGTAA AAACTCCAAT AAAGAGAATG ACATTTAAAG ATGCTATGGA AAAATACGGT TCAGATAAAC CAGACTTAAG ATTTGGAATG GAAATCACAA ACTTAAGTGA TGTTGTTAAA GAATGTGGAT TTAAAGTATT CACAGACGCT GTAGCTAATG GTGGTTCTGT TAGAGGTTTA TGCTTAGAAG GCGGAGCTTC TATGGGAAGA AAAGACATAG ATAGATTAGG AGAGTTCGTT AAAACTTTCA AAGCTAAAGG GTTAGCATGG ATTCAATTAA AAGAAGAGGG TGTTAAATCA CCAATAGCTA AATTCTTTAG TGAAGAAGAG CTAAACAAAA TAATTGAAAC TATGGGAGCT AAAACAGGAG ATTTAATCCT TATAGTTGCT GATAAAAACT CAGTAGTTTT AAAAGCTTTA GGAGAATTAA GATTAGAACT TTCAAGAAAA TTTGATCTAG TTAAAGATAA GAGTGAGTTT AACTTCACAT GGATAACAGA GTTTGATCTT CTTGAGTACG ATGAAGAAGA AGGAAGATAC TTTGCAGCTC ACCATCCATT TACAATGCCA ATGGATGAGG ATATAAAGTA TTTAGATACT GATCCAGGAA GAGTTAGAGC TAAGGCTTAT GACTTAGTAT TAAATGGAGA AGAGTTAGGT GGAGGATCTA TAAGAATACA TGATACTAAA CTTCAAGAAA AAATGTTTGA AGTATTAGGA TTTACTCAAG AATCAGCTTG GGAAAGATTT GGATTCTTAT TAGAAGCATT TAAATTTGGA CCACCACCAC ACGGCGGATT AGCTTTCGGT TTAGATAGAA TGATAATGTT CTTAGCAGGA ACTGAAAATA TCAAGGATGT TATAACATTC CCTAAAAACC AAAATGCATT CTGTTATTTA ACTGAAGCAC CTAATATAGT AGATGAAGAA CAATTAAAAG AATTAGGAAT TGAAACAATA AAGAAAGAAG ATACGGCAGA ATAA
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Protein sequence | MGEALNGLKR NIMCGDARES HIGQKVTVMG WVQRNRNLGG LQFIDLRDRE GILQVVFNDD LGEEILEKAK SIRPEYCIAV TGEIVKRESV NPNMPTGMVE LKAEELKILS ESDTPPIYIK EDLDAAESIR LKYRYLDLRR PDMQNIFKIR HKTTKAIRDY LDQNGFLEME TPILTKSTPE GARDYLVPSR NYPGMFYALP QSPQLFKQLL MVSGFDRYFQ IVKCFRDEDL RANRQPEFTQ VDLEMSFVEQ DDVMALNECL IKHVFKEVLG VDVKTPIKRM TFKDAMEKYG SDKPDLRFGM EITNLSDVVK ECGFKVFTDA VANGGSVRGL CLEGGASMGR KDIDRLGEFV KTFKAKGLAW IQLKEEGVKS PIAKFFSEEE LNKIIETMGA KTGDLILIVA DKNSVVLKAL GELRLELSRK FDLVKDKSEF NFTWITEFDL LEYDEEEGRY FAAHHPFTMP MDEDIKYLDT DPGRVRAKAY DLVLNGEELG GGSIRIHDTK LQEKMFEVLG FTQESAWERF GFLLEAFKFG PPPHGGLAFG LDRMIMFLAG TENIKDVITF PKNQNAFCYL TEAPNIVDEE QLKELGIETI KKEDTAE
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