Gene CPR_1887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1887 
Symbol 
ID4206495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp2084589 
End bp2084939 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content26% 
IMG OID642566437 
ProductTPR repeat-containing protein 
Protein accessionYP_699197 
Protein GI110803470 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACT TTTCTAAAGG TAATGAATTA TACAATACTA GAAATTATTC TGATGCTATA 
AATTACTATA AAAAAGCTCT AAATAACGAT GAGTGTAAAT GCCACAGTTA CTATAATGCT
GGAGTTTGCT ACATAAAACT AAAGCAATAT GAAAAAGCTA TTGAAATGAT AACTAAAGCT
TTAGAGCTAT ACCAAGACTC AAAATATTTT TTTAACTTAG CCTATTGTTA TTCAATGATA
AATAATAATT CTAAGGCTTT AAGATATTTC AACTTAGCCT GGGCATTAGA TAATGCAGAT
ATTGATTGTG AAAAAGCTAT AAGTTTAATT TTATCAAAAA TATCAAAATA A
 
Protein sequence
MSNFSKGNEL YNTRNYSDAI NYYKKALNND ECKCHSYYNA GVCYIKLKQY EKAIEMITKA 
LELYQDSKYF FNLAYCYSMI NNNSKALRYF NLAWALDNAD IDCEKAISLI LSKISK