Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1887 |
Symbol | |
ID | 4206495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 2084589 |
End bp | 2084939 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 642566437 |
Product | TPR repeat-containing protein |
Protein accession | YP_699197 |
Protein GI | 110803470 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACT TTTCTAAAGG TAATGAATTA TACAATACTA GAAATTATTC TGATGCTATA AATTACTATA AAAAAGCTCT AAATAACGAT GAGTGTAAAT GCCACAGTTA CTATAATGCT GGAGTTTGCT ACATAAAACT AAAGCAATAT GAAAAAGCTA TTGAAATGAT AACTAAAGCT TTAGAGCTAT ACCAAGACTC AAAATATTTT TTTAACTTAG CCTATTGTTA TTCAATGATA AATAATAATT CTAAGGCTTT AAGATATTTC AACTTAGCCT GGGCATTAGA TAATGCAGAT ATTGATTGTG AAAAAGCTAT AAGTTTAATT TTATCAAAAA TATCAAAATA A
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Protein sequence | MSNFSKGNEL YNTRNYSDAI NYYKKALNND ECKCHSYYNA GVCYIKLKQY EKAIEMITKA LELYQDSKYF FNLAYCYSMI NNNSKALRYF NLAWALDNAD IDCEKAISLI LSKISK
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