Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1752 |
Symbol | |
ID | 4206197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1951268 |
End bp | 1951741 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642566302 |
Product | PRC-barrel domain-containing protein |
Protein accession | YP_699067 |
Protein GI | 110803713 |
COG category | [S] Function unknown |
COG ID | [COG3881] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.153325 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTATAGAA TAAGAGATTT AATTGGGCTT AAGGTTTTTG ATTCTAATGG AAAGAAGGTT GGAGTAGTTT GTGATCTTGC TATAGATTAT TTTAATGGGA AAGTCATGGG CTTTATAATA ACAAAAAAAT TATTTTCAAA AAGAGATTAT GTGGACTTAA CTAATGTTAT TTCTTTAAGC GATACTATTA TGACAGAAGG GGTACATGTA CATAGAGGAT TAAAATTTAG CGAGATAAAA AACTTTGATC TTATAAATAA GGATGGCCAT ATGATAGGAA TATTAGAAGA TATTTTAATA GACTACGACT TTTATATAAG AGGACTAATA GTGGTAAGTG GATTAGTTGA TAAATTTAAA AATGGAAAGC GAGTTATACA ATTAAAAGAA ACTATTTTAG GAGAAGAAAG TATTTTATTT TTTGGCAATA AAAATATAAA TATGAGAATG ATTCCAAGAA AATATTTTGG CTAG
|
Protein sequence | MYRIRDLIGL KVFDSNGKKV GVVCDLAIDY FNGKVMGFII TKKLFSKRDY VDLTNVISLS DTIMTEGVHV HRGLKFSEIK NFDLINKDGH MIGILEDILI DYDFYIRGLI VVSGLVDKFK NGKRVIQLKE TILGEESILF FGNKNINMRM IPRKYFG
|
| |