Gene CPR_1714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1714 
Symbolfmt 
ID4204360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1909571 
End bp1910500 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content31% 
IMG OID642566264 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_699029 
Protein GI110801608 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAG TATTTATGGG AACACCAGAT TTTGCTGTTC CATCATTAAA GAGCTTAATA 
AATGAATTTG GAGTAGAAGC TGTTTTTACT CAACCAGATA GACCGAAGGG AAGAGGAAAG
AAATTAGGTA TGTCACCTGT AAAGGAAGTT GCTTTAGAAC ACAACATACC AGTTTATCAA
CCTTTAAGAT TAAAAAATGA ACCAGAAACT ATAGAAGAAC TAAAAAATAT GGAGCCAGAC
TTTATAATAG TAGTAGCTTT TGGTCAGATA TTACCTAAAG AGGTTTTAGA TATTCCTAAG
TATGGGTGTA TAAATTTACA TGCTTCATTA CTTCCTAAAT TTAGAGGAGC AGCACCTTTA
AATTGGAGTA TAATCAAAGG AGAAAAGGTA ACAGGAAATA CAACTATGCT TATGGATGTA
GGACTTGATA CTGGTGATAT GCTTTTAAAA GATGAAGTAG AAATAACTGA TAATATGACT
GCAGGAGAAT TACATGATAT TTTAATGGAA AGAGGAGGAG AGTTATTAGT TAGAACTATA
AAGGGCATAC TTAATAATGA AATAACTCCA GAAAAGCAAA ATGAAGAAGA AACATGTTAT
GCTCCAATGC TTAATAAAGA AATAGCTAAA ATTGATTGGT CTCTTTCAGC GCAGGATATT
CATAATTTAG TTAGAGGGTT AAATCCTTGG CCTGTAGCTT TAACTTCATA TGATGATATT
ACAATGAAAG TTCATCAAAC TAGAGTTGAA AAAGGGGAGA GCAATAAAGA GCCAGGAACT
ATAATAGCTG TAGATAAAAC AGGAATTAAG GTTTCAACAG GAAAAGATAT ACTTGTTATA
GAAAAATTAC AGTTTCCAAA TAGTAAGCAA CTATTTGTAG AGCAATTTAT AAATGGAAAC
ACAATAGAAG TAGGTAAAGT TTTAAAATAA
 
Protein sequence
MKIVFMGTPD FAVPSLKSLI NEFGVEAVFT QPDRPKGRGK KLGMSPVKEV ALEHNIPVYQ 
PLRLKNEPET IEELKNMEPD FIIVVAFGQI LPKEVLDIPK YGCINLHASL LPKFRGAAPL
NWSIIKGEKV TGNTTMLMDV GLDTGDMLLK DEVEITDNMT AGELHDILME RGGELLVRTI
KGILNNEITP EKQNEEETCY APMLNKEIAK IDWSLSAQDI HNLVRGLNPW PVALTSYDDI
TMKVHQTRVE KGESNKEPGT IIAVDKTGIK VSTGKDILVI EKLQFPNSKQ LFVEQFINGN
TIEVGKVLK