Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1714 |
Symbol | fmt |
ID | 4204360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1909571 |
End bp | 1910500 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642566264 |
Product | methionyl-tRNA formyltransferase |
Protein accession | YP_699029 |
Protein GI | 110801608 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase |
TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATAG TATTTATGGG AACACCAGAT TTTGCTGTTC CATCATTAAA GAGCTTAATA AATGAATTTG GAGTAGAAGC TGTTTTTACT CAACCAGATA GACCGAAGGG AAGAGGAAAG AAATTAGGTA TGTCACCTGT AAAGGAAGTT GCTTTAGAAC ACAACATACC AGTTTATCAA CCTTTAAGAT TAAAAAATGA ACCAGAAACT ATAGAAGAAC TAAAAAATAT GGAGCCAGAC TTTATAATAG TAGTAGCTTT TGGTCAGATA TTACCTAAAG AGGTTTTAGA TATTCCTAAG TATGGGTGTA TAAATTTACA TGCTTCATTA CTTCCTAAAT TTAGAGGAGC AGCACCTTTA AATTGGAGTA TAATCAAAGG AGAAAAGGTA ACAGGAAATA CAACTATGCT TATGGATGTA GGACTTGATA CTGGTGATAT GCTTTTAAAA GATGAAGTAG AAATAACTGA TAATATGACT GCAGGAGAAT TACATGATAT TTTAATGGAA AGAGGAGGAG AGTTATTAGT TAGAACTATA AAGGGCATAC TTAATAATGA AATAACTCCA GAAAAGCAAA ATGAAGAAGA AACATGTTAT GCTCCAATGC TTAATAAAGA AATAGCTAAA ATTGATTGGT CTCTTTCAGC GCAGGATATT CATAATTTAG TTAGAGGGTT AAATCCTTGG CCTGTAGCTT TAACTTCATA TGATGATATT ACAATGAAAG TTCATCAAAC TAGAGTTGAA AAAGGGGAGA GCAATAAAGA GCCAGGAACT ATAATAGCTG TAGATAAAAC AGGAATTAAG GTTTCAACAG GAAAAGATAT ACTTGTTATA GAAAAATTAC AGTTTCCAAA TAGTAAGCAA CTATTTGTAG AGCAATTTAT AAATGGAAAC ACAATAGAAG TAGGTAAAGT TTTAAAATAA
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Protein sequence | MKIVFMGTPD FAVPSLKSLI NEFGVEAVFT QPDRPKGRGK KLGMSPVKEV ALEHNIPVYQ PLRLKNEPET IEELKNMEPD FIIVVAFGQI LPKEVLDIPK YGCINLHASL LPKFRGAAPL NWSIIKGEKV TGNTTMLMDV GLDTGDMLLK DEVEITDNMT AGELHDILME RGGELLVRTI KGILNNEITP EKQNEEETCY APMLNKEIAK IDWSLSAQDI HNLVRGLNPW PVALTSYDDI TMKVHQTRVE KGESNKEPGT IIAVDKTGIK VSTGKDILVI EKLQFPNSKQ LFVEQFINGN TIEVGKVLK
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