Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1671 |
Symbol | tsf |
ID | 4204172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1866802 |
End bp | 1867713 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642566221 |
Product | elongation factor Ts |
Protein accession | YP_698986 |
Protein GI | 110803529 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000532175 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAACAG CTAAAGCAGT TAAAGAGTTA AGAGAAAGAA CTGGCGCAGG AATGATGGAT TGTAAAAAAG CGCTAACTGA AACTAATGGA GATATGGAAA AAGCAGTTGA AGTTTTAAGA GAAAAAGGAT TAGCAGCTGC AGCTAAAAAA GCTGGAAGAG TAGCAGCTGA AGGTATCGTT AAAACTTACG TATCAGAAGA TATGAAAAAA GGTTCAATAG TTGAAATCAA CTGTGAAACT GACTTCGTTG CTTTAAACGA AGAATTCGTT GGATTTGCAG GAAGAGTAGC AGAATTAGTT GCTAACTCAA ATGTAAACAC TGTAGAAGAA TTATTAGCAG AAAAATTAGA CGGAGACAAA ACTGTTCAAG AAGTTTTAAC TGAGTTAATC GCTAAGATTG GTGAAAACAT GAGCGTAAGA AGATTCGAAA GATTCTCTGT TGAAAGCGGA TTAGTTCAAA GCTACATCCA CGGTGGTGGA AGAATAGGTG TTATGGCTGA ATTAGCATGT GAAGCTTCAT CACCAGTATT AGCTGAAGTT GCTAAAGATG TTTGTATGCA AATAGCTGCT GCTAACCCAC TATTCTTATC AGAAGCTGAT GTTGATCAAG AATCTTTAGA AAAAGAAAAA GAAATATACA GAGCTCAAGC TCTTAACGAA GGTAAACCAG AGCACATCGT TGATAAGATG GTAATGGGAA GAATCAAAAA ATACTGTAAA GAAGTTTGTC TTTTAGATCA AGCTTGGGTA AAAGATGGCG ACAAATCAAT CTCTAAATTA TTAGAAGAAA AATCAAAAGA AGTAGGTTCT CCAATAACTA TAACTAAGTT CGTAAGATTC GAAAGAGGAG AAGGAATCGA AAAGAAAGAA GAAAACTTCG CTGAAGAAGT AGCTAAAATG GGCGGAAAAT AA
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Protein sequence | MITAKAVKEL RERTGAGMMD CKKALTETNG DMEKAVEVLR EKGLAAAAKK AGRVAAEGIV KTYVSEDMKK GSIVEINCET DFVALNEEFV GFAGRVAELV ANSNVNTVEE LLAEKLDGDK TVQEVLTELI AKIGENMSVR RFERFSVESG LVQSYIHGGG RIGVMAELAC EASSPVLAEV AKDVCMQIAA ANPLFLSEAD VDQESLEKEK EIYRAQALNE GKPEHIVDKM VMGRIKKYCK EVCLLDQAWV KDGDKSISKL LEEKSKEVGS PITITKFVRF ERGEGIEKKE ENFAEEVAKM GGK
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