| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1552 |
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| Symbol | |
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| ID | 4204773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1740346 |
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| End bp | 1741458 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642566104 |
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| Product | membrane lipoprotein tmpc precursor |
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| Protein accession | YP_698869 |
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| Protein GI | 110802484 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0275006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAGA AATTTCTTTC AGCTGTATTG GCAGTAATTA CAACAGCTAC TTTACTTGCA
GGTTGTGGAA GTTCAAATGA TGGACAATCA TCATCAGGTG ATACTGGTTC TAAGGGAGAC
AAAATGAAAG TTGGAATGGT TACCGATGCT GGTACAATAG ACGATAAGTC ATTTAACCAA
GGAACTTGGG AAGGAATAAA AAAAGCTGAA AAAGACTTAG GAGTAGAATC TAAGTATTTA
AAACCAAGTG GAACAACAGA AGCTGATTAT TTAAAAGAAA TAGGAAACCT TTACGATGCA
GGATTCAAAT TTATAGTAAC TCCAGGATTC AAATTTGAGA CAGCTATATA TAAAGGACAA
GAAAAATATA AAGATGCTAA ATTTGTATTA TTAGATGGTG CTCCTCATTC AGGCGCTAAA
GATGCAAAAC CAGAAGTATC AGAGAATACG GTTTCAATAT TCTTTGCTGA AGAGCAAGCT
GGTTTTATGG CAGGTGTTGC CACAGCATTA CAACTTAAAG AAGGTCAATT GGGATTTATA
GGAGGAATGG AATTTCCGCC AGTACAAAAA TTTAATTGGG GATTCCAACA AGGGGTAGCC
TTTGCTAATG AAAAATTAGG AACTCACATG TCTCTTGAAG CGAAAAATGT TATATATCAA
GGATCATTTG ATGATTCAGC TGCAGGTGGA CAAATAGCTG CTCAAATGTA TGACAATGGA
GTAAAAGCTA TATTCTGTGC TGCTGGTGGT GTTGGTGTAG GCGCTATACA AGAAGCTAAA
AATAGAGCCG CTTCAGGAAA AGAAGCTTGG ATAATAGGTG TTGACGTTGA CCAATACGAT
GATGGTATAT ATGAAGGAGA TAAATCTGTA ATACTTACTT CAGCAGTTAA GAGAATAGAT
CACGCTTCTT ATGACATGAT AAAAAAAGAA TTAGATGGAA CTTTCCCAGG TGGACAAACT
TTAACATATG ATGCATCAAA TGATGGTGTA GGTTTACCTG ATAAGAATCC AAACTTAAGT
GAAGAAACTA TGACTGAAGT AAATAAAGTA TTTGAACAGT TAAAAAATGG AGAAATAAAA
GTTTCTAACG AAAAAGGAGA CTTAATAAAT TAA
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| Protein sequence | MKKKFLSAVL AVITTATLLA GCGSSNDGQS SSGDTGSKGD KMKVGMVTDA GTIDDKSFNQ
GTWEGIKKAE KDLGVESKYL KPSGTTEADY LKEIGNLYDA GFKFIVTPGF KFETAIYKGQ
EKYKDAKFVL LDGAPHSGAK DAKPEVSENT VSIFFAEEQA GFMAGVATAL QLKEGQLGFI
GGMEFPPVQK FNWGFQQGVA FANEKLGTHM SLEAKNVIYQ GSFDDSAAGG QIAAQMYDNG
VKAIFCAAGG VGVGAIQEAK NRAASGKEAW IIGVDVDQYD DGIYEGDKSV ILTSAVKRID
HASYDMIKKE LDGTFPGGQT LTYDASNDGV GLPDKNPNLS EETMTEVNKV FEQLKNGEIK
VSNEKGDLIN
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