Gene CPR_1381 details

Gene Information

• Locus tag: CPR_1381
• Symbol: engB
• ID: 4205398
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 1551426
• End bp: 1552019
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 642565935
• Product: ribosome biogenesis GTP-binding protein YsxC
• Protein accession: YP_698700
• Protein GI: 110802133
• COG category: [R] General function prediction only
• COG ID: [COG0218] Predicted GTPase
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.479238
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATAA AAAGTTCGGA ATTTATAATA TCAGCGGTTA AGAGAGAACA GTACCCTGAT 
GATAACCTAC CAGAAATAGC TTTTGTTGGT AGATCAAATG TTGGTAAATC TTCTATAATT 
AATTCATTAA CTAATAGAAG AGGCTTAGCA AAGGTAAGTC AAACTCCAGG AAAAACTAGA 
TTAATAAATT TCTTCTTATT AAATAAAGAT TTTTATTTAG TAGATTTACC TGGTTATGGA 
TATGCAAAAG TATCTAAAAA AGAGAAGGCA TCTTGGGGTG CTACAATAGA AAGATATTTA 
TTAAATAGAG GACCTTTAAA GAAGGTTGTT TTATTAGTGG ATTGTAGACA TAAACCTACT 
GCTGATGATG TTCAAATGTA TGAATGGATA AAGCATTATG GATATGAGGT TGTAGTTATC 
GCAACAAAGA GTGATAAGAT ATCTAATAAC CAAATAGGAA AAAGCGAAAA GCTTATAAAA 
GAAACTTTAG GATTACCTAA AGATTACAAA CTTAAGTTCT TCTCTTCATT AAATAAAAAA 
GGAAAAGATG AACTTGTAGA TTATCTTTTT GATGATTTAG TTGAAGAAAT TTAA 

 

Protein sequence

MKIKSSEFII SAVKREQYPD DNLPEIAFVG RSNVGKSSII NSLTNRRGLA KVSQTPGKTR 
LINFFLLNKD FYLVDLPGYG YAKVSKKEKA SWGATIERYL LNRGPLKKVV LLVDCRHKPT 
ADDVQMYEWI KHYGYEVVVI ATKSDKISNN QIGKSEKLIK ETLGLPKDYK LKFFSSLNKK 
GKDELVDYLF DDLVEEI