| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1307 |
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| Symbol | |
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| ID | 4206540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1478637 |
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| End bp | 1479476 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642565863 |
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| Product | degV family protein |
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| Protein accession | YP_698629 |
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| Protein GI | 110801848 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.675608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATAAAA TAAAGATCAT AACAGATAGT ACCTGTGACT TATCTAAGGA GATTATAGAA
AAGTATGATA TAGACGTAAT GCCTATGTTA ATAAATTTTG GAGAAGAGAG CTATTTAGAT
GGAGTCGAAA TAAAAGTAGA CTCTATGATG GAGAGAATTG AAAGAGAAGA TCTTCTTCCA
ACTACAGCTC AAATAGTTCC AACTAGGTTT ATAGAGAAAT ATAAGGGTTA CCTAGAAGAG
GGATATAAAG TTATATCTAT ACATATATCA TCTAATATGA GTGGTACTTA TCAATCAGCA
TGTTTAGCTA AGGCTGAGCT AGAAAGTGAT GATATAGTTG TAATAGATTC AAGAAATGTA
ACAGTTGGAC TTGGATTAAT TGTATTAAAA GCAGCTAGAT TAATAGAATC AGGAATAACT
TTAGAGGATT TAGAAAAAGA AATTTTAGAA TACAGGAATC ATATTAAAAG TACTATAGCC
TTTGAAAGTT TGGACAACTT AGTAAGAGGG GGAAGACTTT CAAAAGGAAA AGCTTTATTT
GTTAGTGCCT TAGGCATAAA ACTTATGCTT AATGTACTAG ATGGGGAAAT GAATGTTCAA
GGAAAAATAA GAGGAACTAA AAAGATGGTA AAGGCTATGA TTGAACAATT TGATTCAATC
CCTAAAAAAG AAGGAGAGCC TATTATACTA GTTGAACTTG AAAATGAGGA CATTTACTTA
CCTATAAAGG AATATTTAGA AAATAATAAT ATTGAATATT TAAAACTTCC TCTAGGATGT
TCAGTAGCAA TTCATTCTGG TCCTAAAGTT TGTGCATTAT TTTATGTAGA AGAATATTAA
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| Protein sequence | MDKIKIITDS TCDLSKEIIE KYDIDVMPML INFGEESYLD GVEIKVDSMM ERIEREDLLP
TTAQIVPTRF IEKYKGYLEE GYKVISIHIS SNMSGTYQSA CLAKAELESD DIVVIDSRNV
TVGLGLIVLK AARLIESGIT LEDLEKEILE YRNHIKSTIA FESLDNLVRG GRLSKGKALF
VSALGIKLML NVLDGEMNVQ GKIRGTKKMV KAMIEQFDSI PKKEGEPIIL VELENEDIYL
PIKEYLENNN IEYLKLPLGC SVAIHSGPKV CALFYVEEY
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