| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1271 |
|---|
| Symbol | |
|---|
| ID | 4204225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 1430864 |
|---|
| End bp | 1432627 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 642565827 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_698593 |
|---|
| Protein GI | 110803314 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG ATACTATTCT TGGTGCTTCT ATTGGCTCTA CTGACTTTCA TTATCTTCAA
AAGGATTATG ATGAAATAAA AAAATTAAAC TTAAATACTT TGACTGAGGT AGCTTGGATA
GGAGATGAAC TTAATTCTAA AATTGTTATG TGGACAAACT CCTCTCCTGT TAATAATGTT
ACCCTCTCTT CAAGTGACTT TATAAATGAA AATGGGGATT TAATCTCTTC AAATAATATT
AAGATTTCTT GGCTTAAAGA AACCTTAGCT AATATAGGAC GTAGTAATCC TTCTGCTCCC
CTTGAACCTT TCCCAGATAT TATTCATAAT TATATTTCAC TAAATATAGA AAAAAATAAA
ATAGCCTCTG CATGGATTAA TATAAAGATT CCTAGGAATG CAAAACCTGG AATTTATAAT
GGTTCTATTG AGGTCACTGC TGATGAATTA GAAAAAGCCT ATACTTTTGA TTATTCCTTT
GAAGTTTTAA ACTTAGTACA ACCTCTTCCA AGGGAAACAA ATACTCAAAT TGAGTTTTGG
CAACATCCTT ACACCATAGC AAGGTATTAT AAAATATCCA AAGAAGATTT ATTTACAGAA
AAGCATTTTA AATATTTAAG AGAGAATCTT AAAGAATATA GAGATATGGG AGGATGTGGT
GTTATAGCCA CTATAGTTCA TGAAGCTTGG AATCATCAAT CTTATGATAG TGACCCTTCA
ATGATTAAGT GGAGAAAAAA CTCCTATGGC ACCTTTGAAT TTGACTACTC TCACTTTGAT
AAGTGGATTC AACTTAATAT AGACTTAGGA ATTCTAGATC CTGAAAAGAG CTTTGGCCAA
ATAAAGTGTT ATAGTATTGT CCCTTGGGAT AATAGAATTC AGTACTTTAA TGAAGCTACT
AATAAAGAAG AAGCCATAAA TCCAAACCCT GGTAGTGATC TTTGGATAAA CATTTGGACA
CAATTTTTAA CTTCATTTAT GTCTCACCTT GAAGAAAAAG GTTGGTTTAA CATAACTTAT
ATTTCAATGG ATGAAAGAAG TATAGATGAT TTAAAAGCTT GTGTTGATTT AATTGAAAGT
ATAACAAATA ACTCTTATGA GCATTTTAAA ATCTCTTCTG CCATGAATTA TGAAAGTGGA
AATGACTACT CTCTCTTAGA TAGAATAGAT GATATATCAA TTGGATTATC CCATATAAAT
CATAATTCTG ATGATATGAA AAATATGGCT AAACATAGAC AAGAACTTGG ATTATTAACT
ACAATATACA CCTGTACTGG AGATTATCCA AGTAGTTTCA CAATAAGTGA CCCTTCAGAA
GGTGCCTTTA CTATGTGGTA TTCCCTATGC CAAAACACTA ATGGATTTAT GCGTTGGTCA
TGGGATGGTT GGGTTGAAAA TCCTTTAAAA AATGTTTCTT ATAAATATTG GGAACCTGGA
GATCCTTTTC TTATATACCC ATCAGAAAAG GATAGCATAG GTAAAACCTT TTACTCTACT
CCTAGATTAG AAAAATTAAA AGAAGGTATA AGAGATATAA ACAAAGCCAA ATACCTTATG
GAAAAGGATC CAAACTTAAA AAAATCTATA GAAAATTTAA TCTACTCTCT AAAAAGACCT
AATAAAGGAG AAAATGCCTA TGGCTCTTCA GTAGCAGCTT CTAAGGAGGA TAGAGATTTA
ACTATCTCAG AAGCAAATAG AATGAAAAAT GGCATAAATA ACTTTGCAAG AGAATTTATT
TCATTAACTA TGAAAACCTT GTAG
|
|---|
| Protein sequence | MKKDTILGAS IGSTDFHYLQ KDYDEIKKLN LNTLTEVAWI GDELNSKIVM WTNSSPVNNV
TLSSSDFINE NGDLISSNNI KISWLKETLA NIGRSNPSAP LEPFPDIIHN YISLNIEKNK
IASAWINIKI PRNAKPGIYN GSIEVTADEL EKAYTFDYSF EVLNLVQPLP RETNTQIEFW
QHPYTIARYY KISKEDLFTE KHFKYLRENL KEYRDMGGCG VIATIVHEAW NHQSYDSDPS
MIKWRKNSYG TFEFDYSHFD KWIQLNIDLG ILDPEKSFGQ IKCYSIVPWD NRIQYFNEAT
NKEEAINPNP GSDLWINIWT QFLTSFMSHL EEKGWFNITY ISMDERSIDD LKACVDLIES
ITNNSYEHFK ISSAMNYESG NDYSLLDRID DISIGLSHIN HNSDDMKNMA KHRQELGLLT
TIYTCTGDYP SSFTISDPSE GAFTMWYSLC QNTNGFMRWS WDGWVENPLK NVSYKYWEPG
DPFLIYPSEK DSIGKTFYST PRLEKLKEGI RDINKAKYLM EKDPNLKKSI ENLIYSLKRP
NKGENAYGSS VAASKEDRDL TISEANRMKN GINNFAREFI SLTMKTL
|
|---|
| |