Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1250 |
Symbol | |
ID | 4206224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1403673 |
End bp | 1404626 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 642565806 |
Product | hypothetical protein |
Protein accession | YP_698572 |
Protein GI | 110803701 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.434596 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCAAT ATAAATTTAT GAGAAAAAAT CTTTCAAAAT ATAAATCTTA TTTATTAACT TCAATTTATG GATTAACTCT AGAATCATCA AAGGGAGGAA AGAATTATAT TAGTAAAGAG TCAACTAAGA AAAATATTGA TGGAGAATTT ATAGACTTAA AGGAAAAACT AAAAAGTGGA TTAGAGTTTA GCAATAAGGA TATTACAAAC ACTAAGTTTA TTCTAGAAAG AAATATAGAA TTTAGAGAAA TATTAAGCAC TGAAATATTA AAAAGTAATG GGTTAGAAAT AGTTGTTGAT AGAGAATTTC CTAATATAGT TCAATATAAA ATAGGAGAGA AGATTTTTAA GGGAGCAAGA AAATCAAGGG ATGAATTTTT AATAAATGGA AGTAGATTTA AACCTAAAGT AACCTCAGAA AAAATTTATG ATCATATTGA AGGAGAGTAC TATTTATATA GATTAAATTT TAGAAAAATA AATGTAGAGA TGTCAATATC TTTTAAAATA ATTGAAAATA CTGTTAAACT TCAGTTTGAA GAAATAAATG AAAATGGAGA ATTTAAGATT TATAAAATAC AAATTCCAAA TCATAATCTT ATAAGCATAA ATGAAGAGGA AGAAAAACTA GACATTACTA CAGCAAGAGT TCATGGGATA TTAAGTTCTA ATGATTACTT TTATGATTTA AGAGAAAAAG AAGTTGATAA AAATCCAGTT CATCAGACCA TGGCATTTTT AGATAATGGA AGATTATTTG CATCTTTAGA GAATAATGTT CTTAATTATG AGGAAAAAGT ATGTTATCAA ACAACTTTAA ATGAAGGGAT TAAAGAAGTA GGCCTTTGGA ATGGCTCGTG GACATATAGG GAGCAATTAA GTGGCTCAGA GGGTGGAACT TTTAGTGGAG TAACTGAATT ACCTTGGTCA AGAATCTTAA TTTTATATTT ATAA
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Protein sequence | MTQYKFMRKN LSKYKSYLLT SIYGLTLESS KGGKNYISKE STKKNIDGEF IDLKEKLKSG LEFSNKDITN TKFILERNIE FREILSTEIL KSNGLEIVVD REFPNIVQYK IGEKIFKGAR KSRDEFLING SRFKPKVTSE KIYDHIEGEY YLYRLNFRKI NVEMSISFKI IENTVKLQFE EINENGEFKI YKIQIPNHNL ISINEEEEKL DITTARVHGI LSSNDYFYDL REKEVDKNPV HQTMAFLDNG RLFASLENNV LNYEEKVCYQ TTLNEGIKEV GLWNGSWTYR EQLSGSEGGT FSGVTELPWS RILILYL
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