| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1215 |
|---|
| Symbol | |
|---|
| ID | 4204883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 1362223 |
|---|
| End bp | 1365150 |
|---|
| Gene Length | 2928 bp |
|---|
| Protein Length | 975 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642565771 |
|---|
| Product | CoA-substrate-specific enzyme activase, putative |
|---|
| Protein accession | YP_698537 |
|---|
| Protein GI | 110801932 |
|---|
| COG category | [I] Lipid transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG1924] Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)
[COG3580] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00241] CoA-substrate-specific enzyme activase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTATTACA AAATAGGTAT TGATGCAGGG TCTACAACCT TAAAGTGTAT AGTCTTAAAT
GAAGAGGACA AAATACTTTA CTCAAATTAT GAAAGACATT ACTCTAAGGT AAGAGAAAAG
CTAATCGAAG AACTAGAAAA TATAAAAGGG ATAATTGAGA ATAAAAAATT TAAGATAGCT
ATAACTGGAT CTGCTGGTTA TGGAATTTCA AAAGAGTATA ATTTACCTTT TGTTCAAGAA
GTATTTGCTA CAACTTTAGC TATAAAAAGA TATTATGATG ATGTGGATGT GGCAATAGAG
CTTGGTGGAG AAGATGCCAA GATAATTTTT TTAACTGGTG GTTTTGAGGA GAGAATGAAC
TCAAGTTGTG CAGGTGGAAC AGGAGCTTTC ATAGATCAAA TGGCTCACCT TATGGGGCTT
ACTGTAGATG AAATGGACAA CTTAAGTCTT AAACATGAGA ATATATATGA GATTGCTTCA
AGATGTGGGG TTTTTGCTAA AACTGATATA CAACCTCTAT TAAATCAAGG AGCAAGAAAA
GAGGATATTT CAGCTAGTGT ATTCCAATCT GTTGTAAATC AAACAATAGG TGGACTAGCA
CAAGGAAGAA GTATTGAGGG AAAAATAATG TTTTTAGGAG GACCTTTATA TTTCTGTAAG
GGATTAAGAG AGAGATTCAT AAAAACATTA AAATTAAAGG ATAATGATGT TGTTTCTCCT
GAAAATGCAC AGGTTTTTGT GGCTATTGGA AGTGCTATAT ATTCTAAAGA AGATAATAAA
AAATATGAAT ATGAGGAATT ATTAAATATA ATAAAAGAAA ATCATAATGA AATATCAACC
ATGAATATAA TAGATCCATT ATTTAATTCT GAAGAAGAAT ATAATGAGTT TAAAGAAAGA
CACCAAAAAG CTGAGGTTAA AGTTAGTGAT ATAAGTAATT ATGCCGGGGA GGCATATATA
GGCATAGATG CTGGAAGTAC TACAACAAAG GTTGTTTTAA TGGATAAAGA GGATAATATT
TTATATGAAT ATTATGGATC TAACAAAGGA AATCCTATTG AAGTTGTAAA AAAAGAATTA
AAGCATATTT ATAATATATG TGGAGAAAAA ATTAAGATAA TGGGTAGTGC AGTTACTGGC
TATGGAGAAG AGCTAATAAA AAAAGCCTTT TCAGTTGATT TTGGAATAGT AGAAACTGTA
GCTCATTATA TTGCAGCAAG TCATTTTAAT CCTAAGGTAG ACTTTATTTT AGATATAGGT
GGACAAGATA TTAAATGCTT TAAAATAAAG GATGGTATTG TGGCTAATAT AATGCTAAAT
GAGGCATGTT CATCTGGATG TGGTTCATTT ATAGAAAGTT TTGCTAATCA AATGGGATAT
GATGTAGAAA CTTTTTCAAA ACTTGGTTTA TTTGCGAAGC ATGGAGCAGA TTTAGGATCA
AGATGTACAG TTTTTATGAA CTCATCAGTA AAACAAGCAC AAAAAGAAGG GGCTACAGTA
GAAGATCTTT CAGCTGGGCT TTCCGTAAGT GTTGTTAAAA ATGCTCTTTA TAAAGTAATA
AGAGCAAAAA GTCTTGATGA ATTAGGAAAA AATATAATTG TTCAAGGGGG AACCATGTAT
AATGATGCCA TCCTTAGAGC CTTTGAAAAA GAGCTTGGTA TAAATGTTAT AAGACCTAGT
ATATCAGGAC TTATGGGGGC TTATGGATGT GCTCTTTATG CAAAAAGAAA AAATTTAAAG
GAAAGTAAGA TAATTTCTAA AGAGGATTTA GAGAGTTTTA CGCATAAATC CAAAATAGCT
AAATGTGGAT TATGTACTAA TAGATGTAAT TTAACAATAA ACATCTTTAA TGATGGAGAA
AAATATATCT CAGGAAATAG ATGTGAAAAA CCAACTGGCA ATAAAAAATC TAAAAGTATT
CCTAATATGT ATCAATATAA ATATAAAAAA TTAAGAGAAT ATGAATCGTT AGATGAAGGA
AAAAGAGGAA CTATAGGATT ACCAATGGTA TTAAATATGT ATGAAAATAT TCCTCTATGG
GCTACATTCT TTAAAGAGTT AGGCTTTAAG GTGGTTTTAT CTGATGAATC AAATAAGAAG
ATGTATTTAA AAGGGCAACA TACAATTCCA TCAGACACTG TGTGTTATCC AGCAAAATTA
GCTCATGGTC ATATAGAAAA CTTAATAAGT AAAAATATAG AGCATATATT CTATCCATGT
ATGAGTTATA ATTTTGACGA AGGTATATCA GATAACTGTT TTAATTGCCC TGTTGTAGCT
TATTATCCAG AACTTTTAAA GACAAATGTA AAAGGGTTAA ATAGTAATAA CTTTATGATG
GAATATTTAA GCTTAAACAA TAAAAAATTA TTAAGCAAAC AACTTTATGA GATTTTAAAT
AAAACTTTTG GAGATGTAAA ACAAAAGGAA GTTAAAAATG CTTTAGAAAA GGCTTATATA
GAGTATGAGA AATATACTAA GCATATAAAA GAAAAAGGGG ACGAGTTTAT AGAGTATGCT
AAAAATAACA ATAAGAAGGT TATAGTAGTA GCAGGAAGGC CTTATCACAT AGATCCAGAA
ATAAATCATG GAATAGACAA GGTTTTAAGT AGCTTAGGAA TTGTTGTTTT AACAGAAGAT
TCTATTGAAG TAAGTCATGA AAAGCAAAAG GTTAATATAT TAAATCAATG GACATATCAA
GCTAGATTAT ATAATGCTGC TTATTATGTT GCTAAAAATA AAGATATGGA ACTTATACAA
TTAGTTTCCT TTGGATGTGG AACAGATGCC ATAACTTCTG ATGAAGTTAA AGACATACTA
GAGAGAAATA ACAAAATATA TACTCAGTTA AAAATAGATG AAACTAATAA TTTAGGCGCA
GCTAAAATAA GGATAAGAAG CTTGCTAGAG GCTATAGCAC AGGAATAG
|
|---|
| Protein sequence | MYYKIGIDAG STTLKCIVLN EEDKILYSNY ERHYSKVREK LIEELENIKG IIENKKFKIA
ITGSAGYGIS KEYNLPFVQE VFATTLAIKR YYDDVDVAIE LGGEDAKIIF LTGGFEERMN
SSCAGGTGAF IDQMAHLMGL TVDEMDNLSL KHENIYEIAS RCGVFAKTDI QPLLNQGARK
EDISASVFQS VVNQTIGGLA QGRSIEGKIM FLGGPLYFCK GLRERFIKTL KLKDNDVVSP
ENAQVFVAIG SAIYSKEDNK KYEYEELLNI IKENHNEIST MNIIDPLFNS EEEYNEFKER
HQKAEVKVSD ISNYAGEAYI GIDAGSTTTK VVLMDKEDNI LYEYYGSNKG NPIEVVKKEL
KHIYNICGEK IKIMGSAVTG YGEELIKKAF SVDFGIVETV AHYIAASHFN PKVDFILDIG
GQDIKCFKIK DGIVANIMLN EACSSGCGSF IESFANQMGY DVETFSKLGL FAKHGADLGS
RCTVFMNSSV KQAQKEGATV EDLSAGLSVS VVKNALYKVI RAKSLDELGK NIIVQGGTMY
NDAILRAFEK ELGINVIRPS ISGLMGAYGC ALYAKRKNLK ESKIISKEDL ESFTHKSKIA
KCGLCTNRCN LTINIFNDGE KYISGNRCEK PTGNKKSKSI PNMYQYKYKK LREYESLDEG
KRGTIGLPMV LNMYENIPLW ATFFKELGFK VVLSDESNKK MYLKGQHTIP SDTVCYPAKL
AHGHIENLIS KNIEHIFYPC MSYNFDEGIS DNCFNCPVVA YYPELLKTNV KGLNSNNFMM
EYLSLNNKKL LSKQLYEILN KTFGDVKQKE VKNALEKAYI EYEKYTKHIK EKGDEFIEYA
KNNNKKVIVV AGRPYHIDPE INHGIDKVLS SLGIVVLTED SIEVSHEKQK VNILNQWTYQ
ARLYNAAYYV AKNKDMELIQ LVSFGCGTDA ITSDEVKDIL ERNNKIYTQL KIDETNNLGA
AKIRIRSLLE AIAQE
|
|---|
| |