Gene CPR_1130 details

Gene Information

• Locus tag: CPR_1130
• Symbol: nadE
• ID: 4204807
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 1275881
• End bp: 1277788
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 642565686
• Product: NAD synthetase
• Protein accession: YP_698452
• Protein GI: 110801895
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0171] NAD synthase
• TIGRFAM ID: [TIGR00552] NAD+ synthetase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTTCA TAAAAGTAGG TGCAGCTTCA CCTAAATTAA AAATAAGCGA TACAAAATAT 
AATCTTAAAG AGATAGAAAC TATGATTTTA AATGCTATAG AAGAAGAGGT TAAGGTTTTA 
GTTTTTCCTG AGCTAAGTAT ATCAGCATAC TCTTGTGGTG ATTTATTTAC CAACGAAAAG 
TTAATTGAAA ATTGTAATTT AGCAATAAAA AATCTAGTTG AATTTTCTAA AGGAAAAGAT 
ATTTTAATAG CTGTTGGTGC TCCTTTTTTA TATAGATATT CCTTATATAA TTGTGCATAT 
ATAATATTAA ATGGAGAACT TTTAGGTATA GTGCCAAAAA GCTATATACC AAACTACTCT 
GAGTTTTATG AAAAAAGATG GTTTACAGAA GGTTTTAATA TAAAAGGATT AAATGTTGAT 
TTAGATTTTC AAAAGGAAGT ACCTTTTGGA ACTGATTTAA TATTCTCATT TAAAAATTTA 
AAAGTAGGTT TTGAAATTTG TGAAGATCTT TGGGTTACTA TACCACCTAG CTCTAATTTA 
GCTTTAATGG GTGCTAACCT TATTTGTAAT CTTTCAGCTT CTAATGAACT TGTATCAAAG 
AGTTCTTATA GAAAATCATT AGTTCAAAAC CAAAGTGCTA GAACAATGTG TTCTTATATT 
TATTCTTCAG CAGGAGTTCA TGAATCAACT ACAGATTTAT TATTTAGTGG TCACATGATA 
ATAGCTGAAA ATGGAACTAT TATAAAAGAA AATAATAGAT TCAAAAGAGA AAATGATTTA 
TTAACTGGTA TAGTTGATTT ATTTAAATTA AACGCAGAAA GAATAAAAAA TATAAGTTTT 
AGAAATTCAA CTTTTAACGA AAATAATGAT CCTAAATTTA TTCCTTTTAA TTTAGAAAAT 
ACAGAGATTA AAAACTTTGA TAGAGAAATA GATAAACATC CTTTTTTACC AAAATCTCAG 
TATGCTATGG AAGAACGCTG CGAAGAAATA TTAAATATAC AAGCTGCTGC CCTTGCTAAA 
AGATTAGAGC ATACAAACCT TAAGAAAGCA GTAATTGGTA TTTCAGGAGG ATTGGATTCT 
ACTCTTGCCC TATTAGTTGT GGTAAAAACT TTTGATATGC TAAATATACC AAGAGAAAAT 
ATAATAACTA TAACTATGCC TGGTTTTGGA ACTACAGATA GAACATACAA TAATGCAGTA 
ACTTTATGCA AGGAACTTAA CTGTGATTTT AGAGAAATAA ATATAGTAAA TGCCGCTCTT 
CAACATTTTG AAGATATAGG CCATGATAAA GATATTCATG ATGTAACATA TGAAAATGTT 
CAAGCAAGAG AAAGAACTCA AATACTTATG GATTTAGCTA ATAAGGAAGG TGGATTATTA 
ATAGGTACTG GAGATCTTTC TGAACTAGCT TTAGGATGGT GTACTTATAA TGGAGATCAT 
ATGTCAATGT ACTCAGTAAA CTGTTCTATT CCTAAAACTT TAGTTAGATT TTTAGTTAAT 
TATTTTGCTA ATCATGAAAT TTCAAATGAT GCTAAGGAAG CTTTATTAGA TATTTTAGAT 
ACTCCTGTAA GTCCAGAATT ATTACCAAAG GATAAAGAAG GTAAAATAGC TCAGAAAACA 
GAAGACATTG TTGGCCCTTA TGAACTTCAT GATTTCTTCT TATATCATTT TATAAAACAC 
GGATCAAGTC CTGAAAGAAT ACTATTCTTA GCTAAGGAAG CATTTAAAAA TGATTATGAT 
GAAGAAACTC TAAAAAAATG GCTAGATAAG TTTATAAGAA GATTCTTTAC TCAACAATTT 
AAGCGTTCTG CTCTTCCAGA TGGACCAAAG GTTGGTTCTA TATCACTTTC TCCTAGAGGT 
GATTGGAGAA TGCCTTCAGA TGCTGTTTAT AATGACTTTT TAATTTAG 

 

Protein sequence

MDFIKVGAAS PKLKISDTKY NLKEIETMIL NAIEEEVKVL VFPELSISAY SCGDLFTNEK 
LIENCNLAIK NLVEFSKGKD ILIAVGAPFL YRYSLYNCAY IILNGELLGI VPKSYIPNYS 
EFYEKRWFTE GFNIKGLNVD LDFQKEVPFG TDLIFSFKNL KVGFEICEDL WVTIPPSSNL 
ALMGANLICN LSASNELVSK SSYRKSLVQN QSARTMCSYI YSSAGVHEST TDLLFSGHMI 
IAENGTIIKE NNRFKRENDL LTGIVDLFKL NAERIKNISF RNSTFNENND PKFIPFNLEN 
TEIKNFDREI DKHPFLPKSQ YAMEERCEEI LNIQAAALAK RLEHTNLKKA VIGISGGLDS 
TLALLVVVKT FDMLNIPREN IITITMPGFG TTDRTYNNAV TLCKELNCDF REINIVNAAL 
QHFEDIGHDK DIHDVTYENV QARERTQILM DLANKEGGLL IGTGDLSELA LGWCTYNGDH 
MSMYSVNCSI PKTLVRFLVN YFANHEISND AKEALLDILD TPVSPELLPK DKEGKIAQKT 
EDIVGPYELH DFFLYHFIKH GSSPERILFL AKEAFKNDYD EETLKKWLDK FIRRFFTQQF 
KRSALPDGPK VGSISLSPRG DWRMPSDAVY NDFLI