Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1117 |
Symbol | |
ID | 4204227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1261315 |
End bp | 1262070 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642565673 |
Product | iron compound ABC transporter, ATP-binding protein, putative |
Protein accession | YP_698439 |
Protein GI | 110803316 |
COG category | [H] Coenzyme transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.606006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTTAGAAG TTAAAAATTT ATGTTGTGGG TATGATGGTA ATGAGGTTAT ACATAATTTA TCTTTTAATA TAAACAGAGG AGAAAATATA TCTATAATAG GACCAAATGG GTGTGGTAAA TCTACAGTGT TAAAAGCCTT AGCTAACTTA ATAGAATACA AAGGTGAAAT AAAGCTAGAT GGGGTAGAAA TTAGAAATAT AAAAAGAAAA GATTTAGCTA AAAAAGTTGC ATTAATGAGT CAAAATTCTG AAGTGTATTT TTCTTATACT GTTTTTGAAA CAGTTTCACT AGGCAGATAT GCTCATATGG ATGGTATTTT TTCAAGTCTT ACAAAGAAAG ATAGGGATAT AGTCTTGAAG TGTATTGAAA GTGTAGGATT ATTAAATGAA AAGGATAGGT TAATAAATGA ACTATCAGGA GGACAACTTC AGAGAGTTTA TTTGGCAAGA GCCTTTGCTC AAGATCCTGA AATATTACTT TTAGATGAAC CAACAAATCA TTTAGACTTA AAATGTCAAA TTGAAATTTT AGATTATATA AATAAATGGA CAAAGGAAAA TAACAAAACT GTTATAGGCG TTTTACATGA TTTAAATTTA GTTCAGATGT TTAGTGAAGA TGCAATTTTA ATAAAAGAAG GTAAAATTTA TAGTAGTGGA AAAGCAAGAG AATTATTAAA TAGTTCTAAA ATTACAGATG TATATAAAAT AGACATAAGA AAATTCATGC TAGAAGCATT AGAAAAATGG AAGTAG
|
Protein sequence | MLEVKNLCCG YDGNEVIHNL SFNINRGENI SIIGPNGCGK STVLKALANL IEYKGEIKLD GVEIRNIKRK DLAKKVALMS QNSEVYFSYT VFETVSLGRY AHMDGIFSSL TKKDRDIVLK CIESVGLLNE KDRLINELSG GQLQRVYLAR AFAQDPEILL LDEPTNHLDL KCQIEILDYI NKWTKENNKT VIGVLHDLNL VQMFSEDAIL IKEGKIYSSG KARELLNSSK ITDVYKIDIR KFMLEALEKW K
|
| |