Gene CPR_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1117 
Symbol 
ID4204227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1261315 
End bp1262070 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content27% 
IMG OID642565673 
Productiron compound ABC transporter, ATP-binding protein, putative 
Protein accessionYP_698439 
Protein GI110803316 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.606006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTAGAAG TTAAAAATTT ATGTTGTGGG TATGATGGTA ATGAGGTTAT ACATAATTTA 
TCTTTTAATA TAAACAGAGG AGAAAATATA TCTATAATAG GACCAAATGG GTGTGGTAAA
TCTACAGTGT TAAAAGCCTT AGCTAACTTA ATAGAATACA AAGGTGAAAT AAAGCTAGAT
GGGGTAGAAA TTAGAAATAT AAAAAGAAAA GATTTAGCTA AAAAAGTTGC ATTAATGAGT
CAAAATTCTG AAGTGTATTT TTCTTATACT GTTTTTGAAA CAGTTTCACT AGGCAGATAT
GCTCATATGG ATGGTATTTT TTCAAGTCTT ACAAAGAAAG ATAGGGATAT AGTCTTGAAG
TGTATTGAAA GTGTAGGATT ATTAAATGAA AAGGATAGGT TAATAAATGA ACTATCAGGA
GGACAACTTC AGAGAGTTTA TTTGGCAAGA GCCTTTGCTC AAGATCCTGA AATATTACTT
TTAGATGAAC CAACAAATCA TTTAGACTTA AAATGTCAAA TTGAAATTTT AGATTATATA
AATAAATGGA CAAAGGAAAA TAACAAAACT GTTATAGGCG TTTTACATGA TTTAAATTTA
GTTCAGATGT TTAGTGAAGA TGCAATTTTA ATAAAAGAAG GTAAAATTTA TAGTAGTGGA
AAAGCAAGAG AATTATTAAA TAGTTCTAAA ATTACAGATG TATATAAAAT AGACATAAGA
AAATTCATGC TAGAAGCATT AGAAAAATGG AAGTAG
 
Protein sequence
MLEVKNLCCG YDGNEVIHNL SFNINRGENI SIIGPNGCGK STVLKALANL IEYKGEIKLD 
GVEIRNIKRK DLAKKVALMS QNSEVYFSYT VFETVSLGRY AHMDGIFSSL TKKDRDIVLK
CIESVGLLNE KDRLINELSG GQLQRVYLAR AFAQDPEILL LDEPTNHLDL KCQIEILDYI
NKWTKENNKT VIGVLHDLNL VQMFSEDAIL IKEGKIYSSG KARELLNSSK ITDVYKIDIR
KFMLEALEKW K