| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1105 |
|---|
| Symbol | |
|---|
| ID | 4203976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 1249925 |
|---|
| End bp | 1250659 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 642565661 |
|---|
| Product | transcriptional regulator, ArsR/dinitrogenase iron-molybdenum cofactor family protein |
|---|
| Protein accession | YP_698427 |
|---|
| Protein GI | 110801752 |
|---|
| COG category | [K] Transcription
[S] Function unknown |
|---|
| COG ID | [COG0640] Predicted transcriptional regulators
[COG1433] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0728142 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGATA AAATAAAAAT ATTTAAAGCA TTAGGAGATG AAACTAGAAT AAATATACTA
CATCTCATAA ATAAAAAATC TATGTGTGCA AAGGGAATAG CTAGAGAACT TAGCATTTCA
GAATCTGCTG TTTCTCAACA AATAAAAGTA TTAAAAGATT CAAATCTCGT AATTGCATAT
AAAATAGGTT ATCAAATTGT TTATGATTTA AATATAGAGC AGTTAGAAAG TATTAATATC
TTAATTGATT ATATCGTAAA TGATTATAAT AATATAAAAA CAAAAGAAAA TATCTATGAA
AAATGCAATA AGATATGTAA ACATGCTAAA TGCATAAATA ATAAAAATTT GAAGGAGGAA
AATATAATGA GAATCTGTTT CCCAGTTAAA AATAATGAAG GAGTTAAAAG TGTACCATAT
GGTCATTTTG GTACTGCTCC AACTTTCGTA ATATGTGATT TAGAAAAAGA TGAAGTAACT
ACTGTAGGCA ATGGTGATTT AGGTCATGAA CATGGAAAAT GTCAACCAAT AAAAGCTTTA
TCAGGTGAAG TTGTAGATGC TGTAGTTGTT GGTGGAATTG GTGCTGGTGC TATAAGTAAA
TTAAATTCTA TGGGAATTAA GGTTTATAAA GCTATTGACG GAGATATAGA AGTTAATTTA
GAATCATTAA AAAAAGGTGA ATTAAAAGAG TTTTCAAGCA CACATACATG CAATCATCAT
GGATGCAGTC ATTAA
|
|---|
| Protein sequence | MEDKIKIFKA LGDETRINIL HLINKKSMCA KGIARELSIS ESAVSQQIKV LKDSNLVIAY
KIGYQIVYDL NIEQLESINI LIDYIVNDYN NIKTKENIYE KCNKICKHAK CINNKNLKEE
NIMRICFPVK NNEGVKSVPY GHFGTAPTFV ICDLEKDEVT TVGNGDLGHE HGKCQPIKAL
SGEVVDAVVV GGIGAGAISK LNSMGIKVYK AIDGDIEVNL ESLKKGELKE FSSTHTCNHH
GCSH
|
|---|
| |