| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1074 |
|---|
| Symbol | hprK |
|---|
| ID | 4205704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 1221102 |
|---|
| End bp | 1222025 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 642565630 |
|---|
| Product | HPr kinase/phosphorylase |
|---|
| Protein accession | YP_698396 |
|---|
| Protein GI | 110802959 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism |
|---|
| TIGRFAM ID | [TIGR00679] Hpr(Ser) kinase/phosphatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0637079 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGTGTTA CAATAGAGAA GTTAATAAAG GATTTTAGTT TAGAGGTAAT TCAAACTGGC
GAAGAGAATG TCCCTATAAA TGTTAGTGAT GTAAATAGAC CAGGATTACA ATTAGCTGGC
TTTTATAACT ATTTTGCTCC AGAAAGAATT CAAGTTATAG GAAAAGCTGA ATGGAGCTTT
TTAGAAGATA TGTCTCCAGA TCTTAGGAAG AAAAGATTAA ATAAATTTTT TTCCTTTGAT
ATATCTTGTC TTATAATAAC TAGAGGTTTA GAGATACATG AGGAACTTTT AAAAGCAGCT
AGAAAGAGAA ACTTATGGAT TCTTAGAAGT GACATGGTAA CTACTAAGTT TATAAGTAAA
ATAACTATGT ATTTATCAGA TAAAATGGCT CCTGAAACAA GATTACATGG GGTTCTTGTT
GATGTATATG GTATAGGAAT GTTAATCACA GGGGAAAGTG GTATAGGTAA AAGTGAAACT
GCCCTAGAAC TTATTAAAAG AGGACATAGA TTAGTAACAG ATGATGCTGT TGATATAAAA
GAAATAGATG GAGATTTAAT AGGCAGATCG CCAGAGATAA CTTTTGGAAT GCTTGAAGTT
AGAGGTATGG GAATAATCGA TGTATCAGCA TTATATGGAT TAAGTTCAAT TTTAAATTCT
AAGCAAATAA AAATAATAAT TCATTTTGAG CATTGGAAAG ATGATGGAGA TTATGATAGA
TTAGGTGTAA ACGACGAATA TCAAGATATA TTAGGTGTTA AAGTTAAAAA ACTAAGGGTT
CCAATAAGAC CTGGAAGAAA CATAGCAGTA ATAATAGAAG CTGCTGCAGC TAATTATAGA
TATCAACGTA TGTCAGACAT TTCACCAGTT GATATAATTG AAAAAAGAAT GCTTGAAAGT
ATGGAAAAAG AGAGTAAAAT TTAA
|
|---|
| Protein sequence | MGVTIEKLIK DFSLEVIQTG EENVPINVSD VNRPGLQLAG FYNYFAPERI QVIGKAEWSF
LEDMSPDLRK KRLNKFFSFD ISCLIITRGL EIHEELLKAA RKRNLWILRS DMVTTKFISK
ITMYLSDKMA PETRLHGVLV DVYGIGMLIT GESGIGKSET ALELIKRGHR LVTDDAVDIK
EIDGDLIGRS PEITFGMLEV RGMGIIDVSA LYGLSSILNS KQIKIIIHFE HWKDDGDYDR
LGVNDEYQDI LGVKVKKLRV PIRPGRNIAV IIEAAAANYR YQRMSDISPV DIIEKRMLES
MEKESKI
|
|---|
| |