Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1018 |
Symbol | |
ID | 4204194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1159408 |
End bp | 1160289 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 24% |
IMG OID | 642565575 |
Product | hypothetical protein |
Protein accession | YP_698341 |
Protein GI | 110802450 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000049195 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAG ATCTGTTTAA TAATGAAGCC TTAGATGATA TTATTTTTAG GTTATCAAAA AGTAATCTTT CAGATTTTTT CTATGAAAAA ATTGGTGAAC GAAACATGAT AATTAGCGGG CTAAATTCTT ATTTTTCTGG AGTAGCTTCT ACAACCTTGA CTGGCTGCTC TTTTCAACTT CAACAATTAA CTCTTTTTAA AAGATTACTA AATGAAGGAG AATTAATTTT AGAATTTTTG CTTGAAAATA AAGATGAATT TAGAAATTGG TTTAATAACA ATCCTTATGC TTATTTTAAA CACTGTTCTA TATTCAAAAA CTCAACATTA GAAAAAGATT ACTATAAAGA TTTTAAATCT TCATACAATG AGCTAACCTC TAAATATAAT TTAAACTTGC TTAATTTTAT ATCATCTCTT ATTTTTCTTT CTTCTTATAA TTGTTGCATA AAGAAAAAAG CAAACTATGA AGAAGCCTTT GTTAAAGCAA TTTTAGAAAA CCATATAGAT AAAGTCTATG AAAAATCTAT TGATATAAAA AATTTTCTTG AAAAATTAGA ATTAAAACCT CTAGAGTTTA AAGATGAAAT AAGAAATTTA TTAGTATTAA TTTCATCTGA ATCCTTATAT TTTGAAGATA TCCCATTAAG ATTATTAGAT TATGCAAATG CAACTGATAT ACTTACCGTT ATAATCTTAA TTGTAAACGT AAAAGAATAC ATTTCAGAAA GTAAGGTTAT TCCTCTTAAT CTATCTAAAA ACTCTTTTAT GAGTACAGAG GAATATAAAA AATTTATGAA TTCTATAAGT GAATCCTATA TTAGAATATA TGATTTTGAT GAAGAGGTTA GAAAAAAAAT AGAAGAAGAT CTTAAACTTT AA
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Protein sequence | MEKDLFNNEA LDDIIFRLSK SNLSDFFYEK IGERNMIISG LNSYFSGVAS TTLTGCSFQL QQLTLFKRLL NEGELILEFL LENKDEFRNW FNNNPYAYFK HCSIFKNSTL EKDYYKDFKS SYNELTSKYN LNLLNFISSL IFLSSYNCCI KKKANYEEAF VKAILENHID KVYEKSIDIK NFLEKLELKP LEFKDEIRNL LVLISSESLY FEDIPLRLLD YANATDILTV IILIVNVKEY ISESKVIPLN LSKNSFMSTE EYKKFMNSIS ESYIRIYDFD EEVRKKIEED LKL
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