| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0917 |
|---|
| Symbol | |
|---|
| ID | 4206569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 1047599 |
|---|
| End bp | 1047862 |
|---|
| Gene Length | 264 bp |
|---|
| Protein Length | 87 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 23% |
|---|
| IMG OID | 642565475 |
|---|
| Product | CRISPR-associated Cas2 family protein |
|---|
| Protein accession | YP_698241 |
|---|
| Protein GI | 110801857 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1343] Uncharacterized protein predicted to be involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0277965 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGTAA TATTAACTTA TGATGTAGGT GAAAAGAGAG TAAATAGAGT AAGAAAGATT
TTGAAAAAAT ATTTAATTTG GACTCAAAAC TCAGTATTTG AAGGGAAAAT AACAGAAGCT
AAATTACATA AATGCTTATC TGAAATAAAT AAAGACTTTA TTAAGGATGA GGACTCTCTA
TATATTTATA GAGTCAAAAA TCCTAATAAT TTAGAAAAAG ATATAATAGG ATTTGAAAAA
AATTGTGATG ATTTGTTTTT ATAA
|
|---|
| Protein sequence | MFVILTYDVG EKRVNRVRKI LKKYLIWTQN SVFEGKITEA KLHKCLSEIN KDFIKDEDSL
YIYRVKNPNN LEKDIIGFEK NCDDLFL
|
|---|
| |