| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0886 |
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| Symbol | |
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| ID | 4204994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1020393 |
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| End bp | 1022066 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642565445 |
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| Product | MutS domain-containing protein |
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| Protein accession | YP_698211 |
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| Protein GI | 110803146 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.437767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTAT ATATTTTTAT TGGAATAATC ATAGTTATTT TATCTGTGAT TTATTACAAC
ATGAAATCCA AAGGTAAGTT TATTAAAAGC TTAAATGAAA GTTTTGGGCA CAAGCCTAAG
GATTATCTTG AAGATTTTGA TATGACCTTT CTAAAAAATC ACTATGAAAT TCGTAAGGAA
AATGAATCCT CTGGTGAATC AATTGATGAG CTAACTTGGA ATGACCTAGA TATGGATGCA
GTCTTTAAGC GTATAAACTA CACAAGGACA AGCTTAGGGG AAGCTTATTT ATACTATAAA
CTTAGAGAAA TTAGTTACAA TAAAGATGAG TGGACAAGCT TAGAAAAACT TATAACCCTA
TTCACCACCA ATGAAGAATT AAGAAATAAA GTATCACTGC TTTTACTGAA AGTAGGAAAG
TTAATTGACC TTAACTTAAC TAATTTCATT TATAATCCTA AGTTTAGCAA AATACCTAGT
TATTATAAAT ACCCCTTATT ATCTTTAGGT TTTATATTTT CAATATTCTT ATCCTTTATT
TACACAAAGG TTGGTCTTAT ACTTAGCTTT ATCTTTCTAT GCATAAATAT ATTATCATAC
CAAAGTGAAA AAATATTTTT GGAAGATAGG TTTAAAGTTA TGATTTATCT ATTAAATAAT
ATTAATCTTT GTATAAGTCT CTCTAAAATT AAGGATAAGG ATTTTGAGTT TTTTAAAAAT
GAAGTAAACT CTGCCCTTCA TAACTTCAAA GCTTTAAATA TAGTTAAAAT TTATGGTAAT
AGCTTTCAAA AGAAGAAAAA TGCCTTTACT GATATTGATA TTATTTTTGA TTACATAAAG
ATGTTTTTTA TGGTGGATAT TATAGCTTAC CAAAACTCAG TTAAAATCTT AGAGAAAAAC
AAGGAGAATC TTTATAAGAT ATATGATATA GTGGCCAAGT TAGATTTTGC CTTAAGCCTT
GCTTACTATA GAAAAAGTCT AAGTGAATAC ACTATCCCAG AATTTATTAA AAGTGATGAT
ATAAGTCTAG AAAATCTATA CCATCCTCTT ATTGATAATC CTGTTAAAAA CTCCATACTT
ATAAAGAATA ATATTCTCTT TACAGGGTCA AATGCTTCTG GTAAGTCTAC CTTTATAAAA
GCAGTAGCTC TAAACTGCAT ACTTGCCCAA AGTTTAAACA CTGCCTTATG TTCAAAATAT
AGATGCAAGT TTTCTAAGGT GGTAACCTCT ATGGCAATAA AAGATAATAT ACTAGCTGGG
GATAGCTACT TCATTGCAGA AATAAAAAGT TTAAAAAGGC TCCTTGACTC TTTAAATGGA
GAAATTAGAG TTTTAGCCTT TATTGATGAA ATATTAAAAG GTACAAACAC CATAGAGAGA
ATCTCAGCCT CAGTCTCCAT ATTAAAATAT GCTGAAAACA CCAATGGAAA ATTGCTAGTA
GCCACTCATG ATATGGAATT AACTCAAATC CTTGAAACCT ATGAAAACTA TCACTTTAGT
GAAACTGTTA CAGAAAATGG AGTAACTTTT GATTACAAAC TAAAAAAAGG ACCTTCCAAT
ACAAGAAATG CCCTAAAACT CCTTAAAGCA ATGAACTTTA ATAAGGACGT AGTTTCCTTA
TCAAACCAAG TATATAATAA TTTCATAGAA ACTGAAAAAT GGGGAAAGCT TTAA
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| Protein sequence | MQLYIFIGII IVILSVIYYN MKSKGKFIKS LNESFGHKPK DYLEDFDMTF LKNHYEIRKE
NESSGESIDE LTWNDLDMDA VFKRINYTRT SLGEAYLYYK LREISYNKDE WTSLEKLITL
FTTNEELRNK VSLLLLKVGK LIDLNLTNFI YNPKFSKIPS YYKYPLLSLG FIFSIFLSFI
YTKVGLILSF IFLCINILSY QSEKIFLEDR FKVMIYLLNN INLCISLSKI KDKDFEFFKN
EVNSALHNFK ALNIVKIYGN SFQKKKNAFT DIDIIFDYIK MFFMVDIIAY QNSVKILEKN
KENLYKIYDI VAKLDFALSL AYYRKSLSEY TIPEFIKSDD ISLENLYHPL IDNPVKNSIL
IKNNILFTGS NASGKSTFIK AVALNCILAQ SLNTALCSKY RCKFSKVVTS MAIKDNILAG
DSYFIAEIKS LKRLLDSLNG EIRVLAFIDE ILKGTNTIER ISASVSILKY AENTNGKLLV
ATHDMELTQI LETYENYHFS ETVTENGVTF DYKLKKGPSN TRNALKLLKA MNFNKDVVSL
SNQVYNNFIE TEKWGKL
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