Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0847 |
Symbol | deaD |
ID | 4205590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 979599 |
End bp | 981035 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642565406 |
Product | ATP-dependent RNA helicase DeaD |
Protein accession | YP_698172 |
Protein GI | 110803350 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.348098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTA ATGAATTAAA TTTAAGTGAG GATATTATTA AAGCGCTTAA TAATTTAGGA TATAAAAATC CATCAGAGGT TCAGGAAGCT TCTATTCCAA AATTATTAAA GGGTGAAGAT ATAATAGTTA AATCTCAAAC TGGTAGTGGT AAAACTGCAA GTTTTGGAAT ACCTGTTTGT GAAAAGATAA ATATTGAAGA AAAAAAGGTT CAGTGTCTAG TTTTAACACC AACTAGAGAG TTAGCAATTC AAGTTAAAGA TGAACTTTCT AATATAGGAA GAATAAAAAA GGTTAGATGT GCGGCTATAT TTGGGAAACA ACCTTTTAAT GAGCAAATTA GAGAGCTTAA ACAAAGAGTA CATATAGTAG TAGGAACTCC AGGAAGAGTA TTTGATCATA TGGAAAGAGG AACTTTAGAC TTAAGTGAAG TTAACTATGT AGTCATAGAT GAAGCTGATA AAATGCTTTC AATGGGATTT ATTGATCAAA TAAAGGACAT ATTAGGAGAA TTAAGATTAA ACAAAACCAC TGCATTATTT TCTGCTACAT TTTCTAAGGA AATAGAGGAA ATATGTGAAG AGTATATGAG AAATCCTATG CTTTTAGAGG TTAAATCAAA AGTATTTAAT AGGGATAGAA TAGAAGAAAG TGCAATTGAG ATAGAAGAGA AAAATAAGGG GAAAGCTTTA TGGAAATGCC TTTATGCTTA TCATCCAGAG AGTGCTATAG TATTTTGTAA TACAAGAAAT AAGGTTAAGT CTGTTTATAA AATGCTTAAG GATGAGGGAA TAACTTGTAA TGAACTTCAT GGGGATATGG AGCAAAAGAA GCGTATTGAG GTTATGGAAA ACTTTAGAGA TAAGCACTTT AAAGTATTAG TTTGTACTGA TATAGCTGCT AGAGGAATTC ATGTAGATAG TATAGAGCTT GTTATAAACT ATGAAGTTCC AATGGAAACA GAAAGTTATG TTCATAGAAT AGGAAGAACT GGTAGAGCAG GAAGAGAAGG AAAGGCTATT ACCTTTGTAA ATCATTATGA GAAGAAATAT TTAGAGAATG TTGAAGAATA TATTGGCTAT GAAATAAGAA AAGCAAGTCT TCCTTCTGAT GAAGAAGTTA AAGCTGGAAG AAAAATATTT AAGGAAAGTC AAAAGGTTCA ATTAAAAGAG AGTAAGAAAC CTAAGAAAGA AGTTCATGGT GATATAGTTA AAATACATGT TAATGGTGGA AAGAAAAAGA AAATAAGAGC CTTTGATATT GTTGGATGTT TTAGTAACTT ACCAGGTTTA ACAGGAGAAG ATATTGGAAT AATAGATGTT CAAGATGGTT TTTCTTATGT TGATATATTA AATGGAAAAG GTGATAAAGT TTTAAAGAGC TTTAAGGAAG TTACTATAAA AGGTAAAAAA GTTAAAATAC AAAAAGCAAG AAAATAA
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Protein sequence | MKFNELNLSE DIIKALNNLG YKNPSEVQEA SIPKLLKGED IIVKSQTGSG KTASFGIPVC EKINIEEKKV QCLVLTPTRE LAIQVKDELS NIGRIKKVRC AAIFGKQPFN EQIRELKQRV HIVVGTPGRV FDHMERGTLD LSEVNYVVID EADKMLSMGF IDQIKDILGE LRLNKTTALF SATFSKEIEE ICEEYMRNPM LLEVKSKVFN RDRIEESAIE IEEKNKGKAL WKCLYAYHPE SAIVFCNTRN KVKSVYKMLK DEGITCNELH GDMEQKKRIE VMENFRDKHF KVLVCTDIAA RGIHVDSIEL VINYEVPMET ESYVHRIGRT GRAGREGKAI TFVNHYEKKY LENVEEYIGY EIRKASLPSD EEVKAGRKIF KESQKVQLKE SKKPKKEVHG DIVKIHVNGG KKKKIRAFDI VGCFSNLPGL TGEDIGIIDV QDGFSYVDIL NGKGDKVLKS FKEVTIKGKK VKIQKARK
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