| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0847 |
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| Symbol | deaD |
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| ID | 4205590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 979599 |
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| End bp | 981035 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642565406 |
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| Product | ATP-dependent RNA helicase DeaD |
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| Protein accession | YP_698172 |
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| Protein GI | 110803350 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.348098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTA ATGAATTAAA TTTAAGTGAG GATATTATTA AAGCGCTTAA TAATTTAGGA
TATAAAAATC CATCAGAGGT TCAGGAAGCT TCTATTCCAA AATTATTAAA GGGTGAAGAT
ATAATAGTTA AATCTCAAAC TGGTAGTGGT AAAACTGCAA GTTTTGGAAT ACCTGTTTGT
GAAAAGATAA ATATTGAAGA AAAAAAGGTT CAGTGTCTAG TTTTAACACC AACTAGAGAG
TTAGCAATTC AAGTTAAAGA TGAACTTTCT AATATAGGAA GAATAAAAAA GGTTAGATGT
GCGGCTATAT TTGGGAAACA ACCTTTTAAT GAGCAAATTA GAGAGCTTAA ACAAAGAGTA
CATATAGTAG TAGGAACTCC AGGAAGAGTA TTTGATCATA TGGAAAGAGG AACTTTAGAC
TTAAGTGAAG TTAACTATGT AGTCATAGAT GAAGCTGATA AAATGCTTTC AATGGGATTT
ATTGATCAAA TAAAGGACAT ATTAGGAGAA TTAAGATTAA ACAAAACCAC TGCATTATTT
TCTGCTACAT TTTCTAAGGA AATAGAGGAA ATATGTGAAG AGTATATGAG AAATCCTATG
CTTTTAGAGG TTAAATCAAA AGTATTTAAT AGGGATAGAA TAGAAGAAAG TGCAATTGAG
ATAGAAGAGA AAAATAAGGG GAAAGCTTTA TGGAAATGCC TTTATGCTTA TCATCCAGAG
AGTGCTATAG TATTTTGTAA TACAAGAAAT AAGGTTAAGT CTGTTTATAA AATGCTTAAG
GATGAGGGAA TAACTTGTAA TGAACTTCAT GGGGATATGG AGCAAAAGAA GCGTATTGAG
GTTATGGAAA ACTTTAGAGA TAAGCACTTT AAAGTATTAG TTTGTACTGA TATAGCTGCT
AGAGGAATTC ATGTAGATAG TATAGAGCTT GTTATAAACT ATGAAGTTCC AATGGAAACA
GAAAGTTATG TTCATAGAAT AGGAAGAACT GGTAGAGCAG GAAGAGAAGG AAAGGCTATT
ACCTTTGTAA ATCATTATGA GAAGAAATAT TTAGAGAATG TTGAAGAATA TATTGGCTAT
GAAATAAGAA AAGCAAGTCT TCCTTCTGAT GAAGAAGTTA AAGCTGGAAG AAAAATATTT
AAGGAAAGTC AAAAGGTTCA ATTAAAAGAG AGTAAGAAAC CTAAGAAAGA AGTTCATGGT
GATATAGTTA AAATACATGT TAATGGTGGA AAGAAAAAGA AAATAAGAGC CTTTGATATT
GTTGGATGTT TTAGTAACTT ACCAGGTTTA ACAGGAGAAG ATATTGGAAT AATAGATGTT
CAAGATGGTT TTTCTTATGT TGATATATTA AATGGAAAAG GTGATAAAGT TTTAAAGAGC
TTTAAGGAAG TTACTATAAA AGGTAAAAAA GTTAAAATAC AAAAAGCAAG AAAATAA
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| Protein sequence | MKFNELNLSE DIIKALNNLG YKNPSEVQEA SIPKLLKGED IIVKSQTGSG KTASFGIPVC
EKINIEEKKV QCLVLTPTRE LAIQVKDELS NIGRIKKVRC AAIFGKQPFN EQIRELKQRV
HIVVGTPGRV FDHMERGTLD LSEVNYVVID EADKMLSMGF IDQIKDILGE LRLNKTTALF
SATFSKEIEE ICEEYMRNPM LLEVKSKVFN RDRIEESAIE IEEKNKGKAL WKCLYAYHPE
SAIVFCNTRN KVKSVYKMLK DEGITCNELH GDMEQKKRIE VMENFRDKHF KVLVCTDIAA
RGIHVDSIEL VINYEVPMET ESYVHRIGRT GRAGREGKAI TFVNHYEKKY LENVEEYIGY
EIRKASLPSD EEVKAGRKIF KESQKVQLKE SKKPKKEVHG DIVKIHVNGG KKKKIRAFDI
VGCFSNLPGL TGEDIGIIDV QDGFSYVDIL NGKGDKVLKS FKEVTIKGKK VKIQKARK
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