| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0846 |
|---|
| Symbol | |
|---|
| ID | 4205979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 978088 |
|---|
| End bp | 979209 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642565405 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_698171 |
|---|
| Protein GI | 110803923 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1929] Glycerate kinase |
|---|
| TIGRFAM ID | [TIGR00045] glycerate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0245025 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTG TATTAGCACC AGATTCATTT AAGGAAAGTA TGACTTCAAT GGAAGCCTGT
AATGCTATGG AAAGAGGAAT TAAAAAGGTC TTTAAAGATG CAGAATGCAT AAAGGTTCCA
ATGGCTGACG GTGGAGAGGG AACTGTAGAA GCTTTAGTTC ATGCTACCTT TGGAAGAATA
GAAAGAGTAA ATGTTACTGG ACCTTTAGGA AATAAGGTGG AAGCTTTTTA TGGAGTTTTA
GGTAATGGAA AGACTGCTGT TATAGAAATG GCTAGTGCTT CAGGGATTCA ACTTGTTAAG
AGAGAAGAAA GAAATCCTTT AATAACAACA ACTTTTGGAA CTGGAGAGCT TATAAAGGCT
GCATTAGATC AAGGAATAAA ACACTTAGTT ATAGGAATAG GTGGAAGTGC CACTAATGAT
GGAGGATGTG GAATGCTTCA AGCTTTAGGT GGAAAACTTT TAGACAAGGA TGGAAATCAA
ATAGCCTTTG GTGGAGGAGC ATTAAAAGAT ATAGAAAGTA TTGATTTAAG TTCTTTAGAT
GAAAGACTAA AGGAAGTATC AATAGAAGTA GCTTGTGATG TAACTAATCC ATTAGTAGGA
GAAAAAGGAG CCTCAGCAGT ATTTGGCCCT CAAAAGGGAG CAACTAAAGA GATTGTTAAA
GAATTAGATA ATAATTTAGC TCATTACGCT TCAGTAATAA AAAAAGACCT AGGAAAAGAA
GTTTCACACA TAGAAGGTTC TGGTGCTGCT GGAGGATTAG GTGCCGCTTT ATTACTATTA
GGTGGAGAAT TAAAAAGAGG TATAGAGCTT GTAATAAAAC ATACAGAGTT AGCTGAAAAG
GTAAAGGGAG CAGACTTTGT ATTTACTGGT GAAGGAAGTA TAGATGATCA AACTATATAC
GGAAAAACAC CAATGGGAGT TGCCACTGTA GCTAAGGAGA ATGGAGTTTC TACAATTGCC
TTTTCAGGAA AAGTTGGAGA GGGGATAGAA GGCCTTTATG AAATAGGTAT AAAGAGTATA
TTTAGTATAA TGACTGGAGT TTTAACTTTA GATGAAGCTT TAAAAGAAGG AAGTAGAAAT
TTAGAATTAA CAACTGAAAA TGTAGTTAGA CTTTTAAAAT AA
|
|---|
| Protein sequence | MKFVLAPDSF KESMTSMEAC NAMERGIKKV FKDAECIKVP MADGGEGTVE ALVHATFGRI
ERVNVTGPLG NKVEAFYGVL GNGKTAVIEM ASASGIQLVK REERNPLITT TFGTGELIKA
ALDQGIKHLV IGIGGSATND GGCGMLQALG GKLLDKDGNQ IAFGGGALKD IESIDLSSLD
ERLKEVSIEV ACDVTNPLVG EKGASAVFGP QKGATKEIVK ELDNNLAHYA SVIKKDLGKE
VSHIEGSGAA GGLGAALLLL GGELKRGIEL VIKHTELAEK VKGADFVFTG EGSIDDQTIY
GKTPMGVATV AKENGVSTIA FSGKVGEGIE GLYEIGIKSI FSIMTGVLTL DEALKEGSRN
LELTTENVVR LLK
|
|---|
| |