Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0678 |
Symbol | |
ID | 4205507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 800340 |
End bp | 800657 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642565238 |
Product | ISCpe2, transposase orfA |
Protein accession | YP_698004 |
Protein GI | 110802630 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTTGGTG ATGTGGATAA ATCTCTTAAA GAAATAATAT TAAAAATAGC AAGTGATAAT AATTTTGAAA TTTCTGAAAT GGAAACTGAT AAAGACCATA TACACCTGTT AATAGAATGT TCTCCACAAC ATCAAATTCC AAATATAATT AAAGCGTTAA AGGGAGTATC TGCAAGGTTA CTGTTCTTGA AACATCCTGA AATTAAAAGA TATCTATGGG GAGGAAACCT ATGGAATCCA AGCTATTTTG TAGCTACTGT ATCAGAGAAT ACAGAAGAAC AAATTAGAAA CTATATTCAA AATCAACAAG AAAAGTGA
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Protein sequence | MFGDVDKSLK EIILKIASDN NFEISEMETD KDHIHLLIEC SPQHQIPNII KALKGVSARL LFLKHPEIKR YLWGGNLWNP SYFVATVSEN TEEQIRNYIQ NQQEK
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