Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0614 |
Symbol | |
ID | 4206616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 732794 |
End bp | 733882 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 642565174 |
Product | spore germination protein, putative |
Protein accession | YP_697941 |
Protein GI | 110801884 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00912] spore germination protein (amino acid permease) |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTGG GAAAGCTAAA TACAAGACAT TTTATATTTT TTATCATTGC TGCCATAAGT ACATCTTTGG TTAACTATAC ATCCTTATTT ATAAAAATAG GCGGAAGAGA TACTTGGATT TTCACTATAA TATCTGGAAT TATATTTTTC TTTGTAACTT CCTTTATTTT TAGTGTAATA TCAAAGATAG AATATTACGA CTTTAAAGAA ACTTGCTATC TAGTTCTTGG TAAATCATTA GGAAATATTT ATATATTAAT ATTTTCACTA ACTTTATTAT TAATGTGCAT AGAATCAGCT TCTGTAAGCT CATCTTCTAT AAATGTTAAT ATTTTTGCGG AGAGTCCAAT ATGGTATTGT TTATTGTTTT TCGTAATAAC TGTATTTTTA ATAGGTAAAA ATAGATTTAA TAGCATACTT ATAATATGTA TAGTTTGCAT AAGTATTGTA CTTGCAATTA ATTTGTTATT AGCATTATTA AATATTAGAT ATATAGATTA CACACTTCTT CTTCCTATAT TTAAGGATAG AAGAATTTCA GAATATATTC TTTGTGCTTT AACTCAATTA GGCTCATTAT CAAGCTTAGC TATAGTTTTA CCTATTCTTC CAAGAATAGA TGATAAGAAA AACTTAAAAA AGATCTCAAT AAACACAATA CTTTTAACCT CTATATTTTG TACTTTGTGT ATTGTCATAC TAATATCAAC CCTAGGTTCT TTGAGGTCTG CAAATGTTTT TTATCCTCAA TTTATCCAAA ACCAAAGAAT TTATTTTGGT GGTTTTGTAG AGAATGGAAA TATTTTTGTA ATGATTTCTT CTACTCTTTC TTGGATTGTA AAATATTTAA TAACTATTTT TTCATTGTAT ACAATTTGGA AAGATAGGGT AAAATATAAA CGTAATTTTA TAGCATTAAT TTCAGTAATA GTATATGTCT TTTCTTACTT AGCCGCTAAG AATGCCTATA CCCTTTTTAT ACTATTAAGA TACTATCAAT ACATACTTCT AATAGTGCTG TTTATATGCC CTATAATCAT ATATACACTA GCCTATTTTA AGAGTCATAA ATTTAAATAT TTGAAGTAA
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Protein sequence | MSLGKLNTRH FIFFIIAAIS TSLVNYTSLF IKIGGRDTWI FTIISGIIFF FVTSFIFSVI SKIEYYDFKE TCYLVLGKSL GNIYILIFSL TLLLMCIESA SVSSSSINVN IFAESPIWYC LLFFVITVFL IGKNRFNSIL IICIVCISIV LAINLLLALL NIRYIDYTLL LPIFKDRRIS EYILCALTQL GSLSSLAIVL PILPRIDDKK NLKKISINTI LLTSIFCTLC IVILISTLGS LRSANVFYPQ FIQNQRIYFG GFVENGNIFV MISSTLSWIV KYLITIFSLY TIWKDRVKYK RNFIALISVI VYVFSYLAAK NAYTLFILLR YYQYILLIVL FICPIIIYTL AYFKSHKFKY LK
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