| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0556 |
|---|
| Symbol | |
|---|
| ID | 4205949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 656994 |
|---|
| End bp | 658307 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642565113 |
|---|
| Product | voltage gated chloride channel family protein |
|---|
| Protein accession | YP_697884 |
|---|
| Protein GI | 110803970 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0038] Chloride channel protein EriC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAA AATCTAAGAA ATATTTAAAG TATATTAGTA GCAATAATAC TTTTCTTCTA
GGAAAGACAT TTTTAAAGTG GCTATTAATA GGAAGTTTAA TAGGAATTTT TATAGGAGGA
GTAATAGCTA TATTTTTAAA ATCTTTAGAA TGGGCAACTG ATTACAGAGT TAATCATGGC
TTTGTTTTAT TTTTACTTCC TATTGGAGGG GCTTTAGTAA GCTTTCTATA CTATAAGTTT
GGAAGGAACT CAGTAAAAGG TAATAATTTA ATTATTGAAA ATATAAATAA TTATTGTGGA
GATGTACCAC TTCGTATGGT TCCTTTAGTT TTCTTTGGAA CAGTTGTAAC TCACTTTTTT
GGAGGATCAG CAGGTAGGGA AGGAACTGGA GTACAGATTG GTGCAAGTAT AGCAGAGACT
ATAGGAAAGT TATTGAAATT AAATAAGGAA GATTCAAAGA TAATGCTTAT GGCAGGGGTA
AGTGGAGGAT TTTCAGCTAT ATTTGGTACA CCACTTGCTG GAACTATATT TGGATTAGAA
GTCTCTGTAT TAGGTAAAAT GAGTTATGAA GCTTTAATAC CAAGTTTCTT TGCTAGTATT
GTAGGAAATG AAGTTGTTAA AAATTTAGGA GTGCATCATT CTCATTATAA GGTTTTAGGA
GTACCAGATA TCTCAGCTCT TATTATTTTA AAAGTAATAA TTTCAGCAAT TTGTTTTGGA
CTAGCTAGTA GATTATTTAG TGAACTTACA CATAAATTAA AAAAAGTATT TTCTAATAAA
TTTAAGAATA CCTCATTAAA AAGCTTTGTA GGAGGATGTA TTGTAATATT ATTAGTTTAT
TTAGTAGGAA GTAGAAAATA TTTAGGTTTA AGTCTTCCTT TATTATCAGA AGCTTTCAAT
GGACATATAT CACCTTTTGA CTTTTTAGGG AAACTTATTT TTACATCAAT AACTTTAGGT
GCTGGATATC AAGGGGGAGA AGTAACGCCT TTATTTGTTA TTGGATCAAC CTTAGGAAAT
ACATTATCAG GAATATTAAA TTTATCACCT TCATTTTTAG CTTCTTTAGG GTTAGTAGGT
GTATTTGCAG GAGCAACTAA TACGCCTATT GCTTCTTTTG TTTTAGGAAT AGAGATGTTT
GGAGTAGGAG GTGCACCATA TTTATTTATG GCGTGTGCAA TAAGTTATAT CTTCTCAGGA
CATACTGGAA TATATACTTC TCAAAAAATA GGAGTAAGTA AGAGTAATTT AATAAGTTTT
TCTCATGATT CAACCCTTGC ATCATTGAGT AAAAGGGAAG AGGAAAAACT ATAG
|
|---|
| Protein sequence | MKQKSKKYLK YISSNNTFLL GKTFLKWLLI GSLIGIFIGG VIAIFLKSLE WATDYRVNHG
FVLFLLPIGG ALVSFLYYKF GRNSVKGNNL IIENINNYCG DVPLRMVPLV FFGTVVTHFF
GGSAGREGTG VQIGASIAET IGKLLKLNKE DSKIMLMAGV SGGFSAIFGT PLAGTIFGLE
VSVLGKMSYE ALIPSFFASI VGNEVVKNLG VHHSHYKVLG VPDISALIIL KVIISAICFG
LASRLFSELT HKLKKVFSNK FKNTSLKSFV GGCIVILLVY LVGSRKYLGL SLPLLSEAFN
GHISPFDFLG KLIFTSITLG AGYQGGEVTP LFVIGSTLGN TLSGILNLSP SFLASLGLVG
VFAGATNTPI ASFVLGIEMF GVGGAPYLFM ACAISYIFSG HTGIYTSQKI GVSKSNLISF
SHDSTLASLS KREEEKL
|
|---|
| |