Gene CPR_0489 details

Gene Information

• Locus tag: CPR_0489
• ID: 4205326
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 581802
• End bp: 582245
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 642565046
• Product: putative PTS system enzyme IIA component protein
• Protein accession: YP_697817
• Protein GI: 110803204
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATTTTA TTAGGGATTT ATTAAATGAG AATAATATAA TTCTCAAGGC TATGGCTTTT 
AACAAAGAAG AGGCAGTTAG ATTGGCTGCG GAGCCTCTTT TAAAAGATGG AAGTATAAGA 
GAGGAATATG TAAAAGATAT TTTAGAGAAA ATCAATGACT TAGGACCATA CATGGCAATT 
ATGCCAGGAG TGGTTATTGC TCATTCTAGA CCAGGTGATT ATGTGTTTAA GGATTGTATT 
AGCATGCTTA CTTTAGAAAA TCCAGTTGAA TTTGGTCATG AGGATAATGA TCCAATAGAA 
ATAATTTTTG TTATTGGAGC AAAGGAAAAC ACAGGTCATT TAGATGCTCT ACAAGATTTA 
GCAAGGGTCT TAATAAATGA GGATTCTGTT AATAGAATTA AAAATGCTCA AAATAAAAAA 
GAGATAATGG AACTTTTTAT GTAA 

 

Protein sequence

MNFIRDLLNE NNIILKAMAF NKEEAVRLAA EPLLKDGSIR EEYVKDILEK INDLGPYMAI 
MPGVVIAHSR PGDYVFKDCI SMLTLENPVE FGHEDNDPIE IIFVIGAKEN TGHLDALQDL 
ARVLINEDSV NRIKNAQNKK EIMELFM